RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.51■■□□□ 1.19
HCFC1R1-208ENST00000575214 EXOC1Q9NV70 894 aa22.51■■□□□ 1.19
HCFC1R1-208ENST00000575214 UBQLN1Q9UMX0 589 aaKnown RBP22.51■■□□□ 1.19
HCFC1R1-208ENST00000575214 TRIP11Q15643 1979 aa22.51■■□□□ 1.19
HCFC1R1-208ENST00000575214 TEX28O15482 410 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 TRAPPC3O43617 180 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 EPCAMP16422 314 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 JADE1Q6IE81 842 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 ARMCX5Q6P1M9 558 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 GPR65Q8IYL9 337 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 NOC3LQ8WTT2 800 aaKnown RBP22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 SAAL1Q96ER3 474 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 CBWD1Q9BRT8 395 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 FAM213AQ9BRX8 229 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 APOL5Q9BWW9 433 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 RXFP1Q9HBX9 757 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 NUB1Q9Y5A7 615 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 I3L4J1 428 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 TULP1O00294 542 aaPredicted RBP22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 ZNF202O95125 648 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 MYL1P05976 194 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 ADRB2P07550 413 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 HOXB8P17481 243 aaPredicted RBP22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 BRCC3P46736 316 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 CLCN4P51793 760 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 CREMQ03060 361 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 PRSS55Q6UWB4 352 aaPredicted RBP22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 CD300LGQ6UXG3 332 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 KRBA2Q6ZNG9 492 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 EPM2AIP1Q7L775 607 aaPredicted RBP22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 GLYCTKQ8IVS8 523 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 NELFCDQ8IXH7 590 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 ZNF507Q8TCN5 953 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 SLC22A17Q8WUG5 538 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 TSPAN18Q96SJ8 248 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 PCIF1Q9H4Z3 704 aa22.5■■□□□ 1.19
HCFC1R1-208ENST00000575214 UBE4BO95155 1302 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 TCF20Q9UGU0 1960 aaKnown RBP22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 MUC3AQ02505 3323 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 SPDYE4A6NLX3 237 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 KLRC4O43908 158 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 LDHAP00338 332 aaKnown RBP22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 NFICP08651 508 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 RPL17P18621 184 aaKnown RBP22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 CYP3A5P20815 502 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 TMEM132DQ14C87 1099 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 ZBTB6Q15916 424 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 PSMD5Q16401 504 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 KMT5BQ4FZB7 885 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 SYCE2Q6PIF2 218 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 CRELD2Q6UXH1 353 aaPredicted RBP22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 TMEM130Q8N3G9 435 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 ZSWIM2Q8NEG5 633 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 BEST2Q8NFU1 509 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 SCFD1Q8WVM8 642 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 PIK3R5Q8WYR1 880 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 ASB7Q9H672 318 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 DZANK1Q9NVP4 752 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 FNIP2Q9P278 1114 aa22.49■■□□□ 1.19
HCFC1R1-208ENST00000575214 GOLGA8IPA6NC78 632 aa22.48■■□□□ 1.19
HCFC1R1-208ENST00000575214 GOLGA8JA6NMD2 632 aa22.48■■□□□ 1.19
HCFC1R1-208ENST00000575214 GLUD1P00367 558 aa22.48■■□□□ 1.19
HCFC1R1-208ENST00000575214 PRR29P0C7W0 189 aa22.48■■□□□ 1.19
HCFC1R1-208ENST00000575214 MCM4P33991 863 aa22.48■■□□□ 1.19
HCFC1R1-208ENST00000575214 HOXD13P35453 343 aa22.48■■□□□ 1.19
HCFC1R1-208ENST00000575214 GUCY2FP51841 1108 aa22.48■■□□□ 1.19
HCFC1R1-208ENST00000575214 POU5F1Q01860 360 aaKnown RBP22.48■■□□□ 1.19
HCFC1R1-208ENST00000575214 SMAD2Q15796 467 aaKnown RBP22.48■■□□□ 1.19
HCFC1R1-208ENST00000575214 PDXDC1Q6P996 788 aa22.48■■□□□ 1.19
HCFC1R1-208ENST00000575214 CCDC34Q96HJ3 373 aa22.48■■□□□ 1.19
HCFC1R1-208ENST00000575214 FBXL18Q96ME1 805 aa22.48■■□□□ 1.19
HCFC1R1-208ENST00000575214 DERAQ9Y315 318 aa22.48■■□□□ 1.19
HCFC1R1-208ENST00000575214 USP15Q9Y4E8 981 aaPredicted RBP22.48■■□□□ 1.19
HCFC1R1-208ENST00000575214 KIAA0391O15091 583 aaKnown RBP22.47■■□□□ 1.19
HCFC1R1-208ENST00000575214 EXTL3O43909 919 aa22.47■■□□□ 1.19
HCFC1R1-208ENST00000575214 IL18RAPO95256 599 aa22.47■■□□□ 1.19
HCFC1R1-208ENST00000575214 FGFR3P22607 806 aa22.47■■□□□ 1.19
HCFC1R1-208ENST00000575214 TKTP29401 623 aaKnown RBP22.47■■□□□ 1.19
HCFC1R1-208ENST00000575214 LRPAP1P30533 357 aa22.47■■□□□ 1.19
HCFC1R1-208ENST00000575214 SPATA1Q5VX52 437 aa22.47■■□□□ 1.19
HCFC1R1-208ENST00000575214 LNX1Q8TBB1 728 aaPredicted RBP22.47■■□□□ 1.19
HCFC1R1-208ENST00000575214 CCDC47Q96A33 483 aaKnown RBP22.47■■□□□ 1.19
HCFC1R1-208ENST00000575214 RBAKQ9NYW8 714 aaPredicted RBP22.47■■□□□ 1.19
HCFC1R1-208ENST00000575214 BDP1A6H8Y1 2624 aa22.46■■□□□ 1.19
HCFC1R1-208ENST00000575214 RPN1P04843 607 aaKnown RBP22.46■■□□□ 1.19
HCFC1R1-208ENST00000575214 PSMD2Q13200 908 aa22.46■■□□□ 1.19
HCFC1R1-208ENST00000575214 RARS2Q5T160 578 aaKnown RBP22.46■■□□□ 1.19
HCFC1R1-208ENST00000575214 PALB2Q86YC2 1186 aa22.46■■□□□ 1.19
HCFC1R1-208ENST00000575214 BRSK2Q8IWQ3 736 aa22.46■■□□□ 1.19
HCFC1R1-208ENST00000575214 GPD1LQ8N335 351 aa22.46■■□□□ 1.19
HCFC1R1-208ENST00000575214 C12orf76Q8N812 135 aaPredicted RBP22.46■■□□□ 1.19
HCFC1R1-208ENST00000575214 S1PR5Q9H228 398 aa22.46■■□□□ 1.19
HCFC1R1-208ENST00000575214 MAN1C1Q9NR34 630 aa22.46■■□□□ 1.19
HCFC1R1-208ENST00000575214 CHMP5Q9NZZ3 219 aa22.46■■□□□ 1.19
HCFC1R1-208ENST00000575214 C2CD2Q9Y426 696 aa22.46■■□□□ 1.19
HCFC1R1-208ENST00000575214 PDCD11Q14690 1871 aaKnown RBP22.45■■□□□ 1.19
HCFC1R1-208ENST00000575214 DPYDQ12882 1025 aa22.45■■□□□ 1.18
HCFC1R1-208ENST00000575214 STK4Q13043 487 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms