RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 ZACNQ401N2 412 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 C15orf39Q6ZRI6 1047 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 TRAPPC11Q7Z392 1133 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 ZNF598Q86UK7 904 aaKnown RBP22.87■■□□□ 1.25
CXCL16-203ENST00000574412 PGBD4Q96DM1 585 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 INTS2Q9H0H0 1204 aaKnown RBP22.87■■□□□ 1.25
CXCL16-203ENST00000574412 RSAD1Q9HA92 442 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 C1orf112Q9NSG2 853 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 TUBGCP4Q9UGJ1 667 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 PLAGL2Q9UPG8 496 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 INPP5FQ9Y2H2 1132 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 TTC3P53804 2025 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 SMIM28A0A1B0GU29 152 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 ARL5CA6NH57 179 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 EPHB6O15197 1021 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 VNN1O95497 513 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 FGFR1P11362 822 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 PIK3CAP42336 1068 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 EPC2Q52LR7 807 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 DPF3Q92784 378 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 RPS6KC1Q96S38 1066 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 BAG1Q99933 345 aaPredicted RBP22.87■■□□□ 1.25
CXCL16-203ENST00000574412 PI4K2AQ9BTU6 479 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 ABHD10Q9NUJ1 306 aa22.87■■□□□ 1.25
CXCL16-203ENST00000574412 LUC7L2Q9Y383 392 aaKnown RBP22.87■■□□□ 1.25
CXCL16-203ENST00000574412 A0A1W2PQJ5 194 aa22.86■■□□□ 1.25
CXCL16-203ENST00000574412 PTGESO14684 152 aa22.86■■□□□ 1.25
CXCL16-203ENST00000574412 HLA-DRAP01903 254 aa22.86■■□□□ 1.25
CXCL16-203ENST00000574412 KRT19P08727 400 aa22.86■■□□□ 1.25
CXCL16-203ENST00000574412 CETN1Q12798 172 aa22.86■■□□□ 1.25
CXCL16-203ENST00000574412 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.86■■□□□ 1.25
CXCL16-203ENST00000574412 CD302Q8IX05 232 aa22.86■■□□□ 1.25
CXCL16-203ENST00000574412 C1orf127Q8N9H9 656 aa22.86■■□□□ 1.25
CXCL16-203ENST00000574412 FBXL13Q8NEE6 735 aa22.86■■□□□ 1.25
CXCL16-203ENST00000574412 RRAGDQ9NQL2 400 aaPredicted RBP22.86■■□□□ 1.25
CXCL16-203ENST00000574412 MIOSQ9NXC5 875 aa22.86■■□□□ 1.25
CXCL16-203ENST00000574412 GIT1Q9Y2X7 761 aa22.86■■□□□ 1.25
CXCL16-203ENST00000574412 C2CD2Q9Y426 696 aa22.86■■□□□ 1.25
CXCL16-203ENST00000574412 GTPBP10A4D1E9 387 aaKnown RBP22.85■■□□□ 1.25
CXCL16-203ENST00000574412 CST3P01034 146 aaPredicted RBP22.85■■□□□ 1.25
CXCL16-203ENST00000574412 SCNN1GP51170 649 aa22.85■■□□□ 1.25
CXCL16-203ENST00000574412 FAM189BP81408 668 aa22.85■■□□□ 1.25
CXCL16-203ENST00000574412 IKBKEQ14164 716 aa22.85■■□□□ 1.25
CXCL16-203ENST00000574412 GJB7Q6PEY0 223 aa22.85■■□□□ 1.25
CXCL16-203ENST00000574412 C17orf53Q8N3J3 647 aaPredicted RBP22.85■■□□□ 1.25
CXCL16-203ENST00000574412 NEK11Q8NG66 645 aa22.85■■□□□ 1.25
CXCL16-203ENST00000574412 HELQQ8TDG4 1101 aa22.85■■□□□ 1.25
CXCL16-203ENST00000574412 GOLGA2P5Q9HBQ8 144 aa22.85■■□□□ 1.25
CXCL16-203ENST00000574412 P4HA2O15460 535 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 ZNF500O60304 480 aaPredicted RBP22.84■■□□□ 1.25
CXCL16-203ENST00000574412 POMCP01189 267 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 ITGB3P05106 788 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 AP3M2P53677 418 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 ZBED6P86452 979 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 NCOA4Q13772 614 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 XKR4Q5GH76 650 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 TRIM65Q6PJ69 517 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 EHBP1Q8NDI1 1231 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 GSTCDQ8NEC7 633 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 LMO3Q8TAP4 145 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 RAB20Q9NX57 234 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 DPP3Q9NY33 737 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 CACNG4Q9UBN1 327 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 EOMESO95936 686 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 KCNE1P15382 129 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 FECHP22830 423 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 SOX4Q06945 474 aaPredicted RBP22.84■■□□□ 1.25
CXCL16-203ENST00000574412 CLLU1OSQ5K130 101 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 SPOPLQ6IQ16 392 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 RPUSD2Q8IZ73 545 aaKnown RBP22.84■■□□□ 1.25
CXCL16-203ENST00000574412 OR8K1Q8NGG5 319 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 DNAJC7Q99615 494 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 SIX2Q9NPC8 291 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 TMEM161AQ9NX61 479 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 SIX4Q9UIU6 781 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 LRFN2Q9ULH4 789 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 COQ4Q9Y3A0 265 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 PCDHB7Q9Y5E2 793 aa22.84■■□□□ 1.25
CXCL16-203ENST00000574412 SCN1AP35498 2009 aa22.83■■□□□ 1.25
CXCL16-203ENST00000574412 NOL4O94818 638 aa22.83■■□□□ 1.24
CXCL16-203ENST00000574412 UPP2O95045 317 aa22.83■■□□□ 1.24
CXCL16-203ENST00000574412 GATMP50440 423 aa22.83■■□□□ 1.24
CXCL16-203ENST00000574412 TRPC3Q13507 836 aa22.83■■□□□ 1.24
CXCL16-203ENST00000574412 ZBTB6Q15916 424 aa22.83■■□□□ 1.24
CXCL16-203ENST00000574412 OTOP2Q7RTS6 562 aa22.83■■□□□ 1.24
CXCL16-203ENST00000574412 NAA15Q9BXJ9 866 aaKnown RBP22.83■■□□□ 1.24
CXCL16-203ENST00000574412 EDEM3Q9BZQ6 932 aa22.83■■□□□ 1.24
CXCL16-203ENST00000574412 IL23AQ9NPF7 189 aa22.83■■□□□ 1.24
CXCL16-203ENST00000574412 NLRC4Q9NPP4 1024 aa22.83■■□□□ 1.24
CXCL16-203ENST00000574412 DERAQ9Y315 318 aa22.83■■□□□ 1.24
CXCL16-203ENST00000574412 PMM2O15305 246 aa22.82■■□□□ 1.24
CXCL16-203ENST00000574412 ARHGAP6O43182 974 aa22.82■■□□□ 1.24
CXCL16-203ENST00000574412 OFD1O75665 1012 aa22.82■■□□□ 1.24
CXCL16-203ENST00000574412 POLR2BP30876 1174 aaKnown RBP22.82■■□□□ 1.24
CXCL16-203ENST00000574412 MYL6P60660 151 aa22.82■■□□□ 1.24
CXCL16-203ENST00000574412 FPGSQ05932 587 aa22.82■■□□□ 1.24
CXCL16-203ENST00000574412 DPY19L2P1Q6NXN4 242 aa22.82■■□□□ 1.24
CXCL16-203ENST00000574412 GLB1LQ6UWU2 654 aa22.82■■□□□ 1.24
CXCL16-203ENST00000574412 TMCO2Q7Z6W1 182 aaPredicted RBP22.82■■□□□ 1.24
CXCL16-203ENST00000574412 GPIHBP1Q8IV16 184 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms