RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 CAMK1Q14012 370 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 SKIV2LQ15477 1246 aaKnown RBP13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 CCDC85BQ15834 202 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 ZBTB6Q15916 424 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 NFIL3Q16649 462 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 SPATA1Q5VX52 437 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 PLPP4Q5VZY2 271 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 PDXDC1Q6P996 788 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 SMYD4Q8IYR2 804 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 RDH13Q8NBN7 331 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 PPM1EQ8WY54 764 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 C18orf25Q96B23 403 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 DHTKD1Q96HY7 919 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 ANKRD36BP1Q96IX9 119 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 PAAF1Q9BRP4 392 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 HERC2P3Q9BVR0 1158 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 ZBP1Q9H171 429 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 GOLGA2P5Q9HBQ8 144 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 MRPL17Q9NRX2 175 aaKnown RBP13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 MEFVO15553 781 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 KIF4AO95239 1232 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 CXCL14O95715 111 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 TNNC2P02585 160 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 NFICP08651 508 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 NR2F2P24468 414 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 GLUD2P49448 558 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 TFAMQ00059 246 aaKnown RBP13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 LRRC63Q05C16 580 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 SOX4Q06945 474 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 ADAM9Q13443 819 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 MORC3Q14149 939 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 EDRF1Q3B7T1 1238 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 ISM2Q6H9L7 571 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 CBWD2Q8IUF1 395 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 GPR65Q8IYL9 337 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 MRPL43Q8N983 215 aaKnown RBP13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 ZSWIM2Q8NEG5 633 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 HASPINQ8TF76 798 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 BCL7CQ8WUZ0 217 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 RABGGTAQ92696 567 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 CDCA3Q99618 268 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 EMILIN2Q9BXX0 1053 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 TLE6Q9H808 572 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 PDE11AQ9HCR9 933 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 DPP3Q9NY33 737 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 TUBGCP4Q9UGJ1 667 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 IRAK3Q9Y616 596 aa13.82□□□□□ -0.2
TRAPPC1-206ENST00000573989 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 BICDL2A1A5D9 508 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 ARHGEF37A1IGU5 675 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 BIN1O00499 593 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 CETN3O15182 167 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 MAPK13O15264 365 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 SRGAP2BP0DMP2 458 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 TNNI1P19237 187 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 MCM4P33991 863 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 IRS1P35568 1242 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 CYP24A1Q07973 514 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 PSMD6Q15008 389 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 DUOXA2Q1HG44 320 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 TCEAL5Q5H9L2 206 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 FAM171A1Q5VUB5 890 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 CEP135Q66GS9 1140 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 WDR49Q8IV35 697 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 ADSSL1Q8N142 457 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 ZNF560Q96MR9 790 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 TTPALQ9BTX7 342 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 DMAC2Q9NW81 257 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 CACNG4Q9UBN1 327 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 ITGA11Q9UKX5 1188 aa13.81□□□□□ -0.2
TRAPPC1-206ENST00000573989 C2orf71A6NGG8 1288 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 F8W810 466 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 DLATP10515 647 aaKnown RBP13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 KRT13P13646 458 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 CCNE1P24864 410 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 PSMC2P35998 433 aaKnown RBP13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 PNPLA4P41247 253 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 AP3M2P53677 418 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 FKBP3Q00688 224 aaKnown RBP13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 DSG1Q02413 1049 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 C9orf57Q5W0N0 161 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 CENPPQ6IPU0 288 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 RBM23Q86U06 439 aaKnown RBP13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 PPFIBP1Q86W92 1011 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 CEP57Q86XR8 500 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 EFCAB13Q8IY85 973 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 RNF168Q8IYW5 571 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 APPL2Q8NEU8 664 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 GPT2Q8TD30 523 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 CCDC127Q96BQ5 260 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 MFSD14AQ96MC6 490 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 VN1R3Q9BXE9 311 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 GPR62Q9BZJ7 368 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 CHST7Q9NS84 486 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 INTS13Q9NVM9 706 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 COG5Q9UP83 839 aa13.8□□□□□ -0.2
TRAPPC1-206ENST00000573989 HIDE1A8MVS5 230 aa13.79□□□□□ -0.2
TRAPPC1-206ENST00000573989 PIRO00625 290 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms