RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 TOPORSQ9NS56 1045 aaPredicted RBP24.1■■□□□ 1.45
SNF8-216ENST00000573795 DNM3Q9UQ16 869 aa24.1■■□□□ 1.45
SNF8-216ENST00000573795 MTF2Q9Y483 593 aaPredicted RBP24.1■■□□□ 1.45
SNF8-216ENST00000573795 STK24Q9Y6E0 443 aa24.1■■□□□ 1.45
SNF8-216ENST00000573795 MYH11P35749 1972 aa24.1■■□□□ 1.45
SNF8-216ENST00000573795 KANSL1LA0AUZ9 987 aa24.09■■□□□ 1.45
SNF8-216ENST00000573795 ARHGEF37A1IGU5 675 aa24.09■■□□□ 1.45
SNF8-216ENST00000573795 ABLIM3O94929 683 aa24.09■■□□□ 1.45
SNF8-216ENST00000573795 LMNAP02545 664 aaKnown RBP24.09■■□□□ 1.45
SNF8-216ENST00000573795 RHOP08100 348 aa24.09■■□□□ 1.45
SNF8-216ENST00000573795 MCF2P10911 925 aa24.09■■□□□ 1.45
SNF8-216ENST00000573795 DMP1Q13316 513 aaPredicted RBP24.09■■□□□ 1.45
SNF8-216ENST00000573795 SLC44A4Q53GD3 710 aa24.09■■□□□ 1.45
SNF8-216ENST00000573795 ZNF461Q8TAF7 563 aa24.09■■□□□ 1.45
SNF8-216ENST00000573795 C18orf25Q96B23 403 aaPredicted RBP24.09■■□□□ 1.45
SNF8-216ENST00000573795 SHDQ96IW2 340 aa24.09■■□□□ 1.45
SNF8-216ENST00000573795 SEMA4AQ9H3S1 761 aa24.09■■□□□ 1.45
SNF8-216ENST00000573795 KMT5AQ9NQR1 393 aa24.09■■□□□ 1.45
SNF8-216ENST00000573795 AVENQ9NQS1 362 aaPredicted RBP24.09■■□□□ 1.45
SNF8-216ENST00000573795 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.09■■□□□ 1.45
SNF8-216ENST00000573795 CNTN3Q9P232 1028 aa24.09■■□□□ 1.45
SNF8-216ENST00000573795 NRG2O14511 850 aaPredicted RBP24.08■■□□□ 1.45
SNF8-216ENST00000573795 CEBPBP17676 345 aa24.08■■□□□ 1.45
SNF8-216ENST00000573795 PRKCQQ04759 706 aa24.08■■□□□ 1.45
SNF8-216ENST00000573795 MRPL58Q14197 206 aaKnown RBP24.08■■□□□ 1.45
SNF8-216ENST00000573795 ERICH6BQ5W0A0 696 aa24.08■■□□□ 1.45
SNF8-216ENST00000573795 KRT79Q5XKE5 535 aa24.08■■□□□ 1.45
SNF8-216ENST00000573795 MPZL3Q6UWV2 235 aa24.08■■□□□ 1.45
SNF8-216ENST00000573795 ZBTB45Q96K62 511 aaPredicted RBP24.08■■□□□ 1.45
SNF8-216ENST00000573795 DRC1Q96MC2 740 aa24.08■■□□□ 1.45
SNF8-216ENST00000573795 RAB34Q9BZG1 259 aa24.08■■□□□ 1.45
SNF8-216ENST00000573795 PLA2G2FQ9BZM2 168 aa24.08■■□□□ 1.45
SNF8-216ENST00000573795 SLC38A7Q9NVC3 462 aa24.08■■□□□ 1.45
SNF8-216ENST00000573795 MRPS23Q9Y3D9 190 aaKnown RBP24.08■■□□□ 1.45
SNF8-216ENST00000573795 COL4A2P08572 1712 aa24.07■■□□□ 1.44
SNF8-216ENST00000573795 SFI1A8K8P3 1242 aa24.07■■□□□ 1.44
SNF8-216ENST00000573795 SLC16A4O15374 487 aa24.07■■□□□ 1.44
SNF8-216ENST00000573795 SEC24AO95486 1093 aa24.07■■□□□ 1.44
SNF8-216ENST00000573795 PRPHP41219 470 aa24.07■■□□□ 1.44
SNF8-216ENST00000573795 PRSS36Q5K4E3 855 aa24.07■■□□□ 1.44
SNF8-216ENST00000573795 TMEM130Q8N3G9 435 aa24.07■■□□□ 1.44
SNF8-216ENST00000573795 MCRS1Q96EZ8 462 aa24.07■■□□□ 1.44
SNF8-216ENST00000573795 ACAP3Q96P50 834 aa24.07■■□□□ 1.44
SNF8-216ENST00000573795 RBM19Q9Y4C8 960 aaKnown RBP24.07■■□□□ 1.44
SNF8-216ENST00000573795 LAD1O00515 517 aa24.06■■□□□ 1.44
SNF8-216ENST00000573795 SYN3O14994 580 aa24.06■■□□□ 1.44
SNF8-216ENST00000573795 ECI2O75521 394 aa24.06■■□□□ 1.44
SNF8-216ENST00000573795 GUCY2CP25092 1073 aa24.06■■□□□ 1.44
SNF8-216ENST00000573795 KCNG4Q8TDN1 519 aa24.06■■□□□ 1.44
SNF8-216ENST00000573795 PNMA5Q96PV4 448 aa24.06■■□□□ 1.44
SNF8-216ENST00000573795 NTPCRQ9BSD7 190 aaKnown RBP24.06■■□□□ 1.44
SNF8-216ENST00000573795 C17orf75Q9HAS0 396 aa24.06■■□□□ 1.44
SNF8-216ENST00000573795 LTB4R2Q9NPC1 389 aa24.06■■□□□ 1.44
SNF8-216ENST00000573795 GDE1Q9NZC3 331 aa24.06■■□□□ 1.44
SNF8-216ENST00000573795 FBXL5Q9UKA1 691 aa24.06■■□□□ 1.44
SNF8-216ENST00000573795 GPR179Q6PRD1 2367 aa24.05■■□□□ 1.44
SNF8-216ENST00000573795 SHISA7A6NL88 538 aa24.05■■□□□ 1.44
SNF8-216ENST00000573795 HARSP12081 509 aaKnown RBP24.05■■□□□ 1.44
SNF8-216ENST00000573795 ATF2P15336 505 aa24.05■■□□□ 1.44
SNF8-216ENST00000573795 CD72P21854 359 aa24.05■■□□□ 1.44
SNF8-216ENST00000573795 FCARP24071 287 aa24.05■■□□□ 1.44
SNF8-216ENST00000573795 ID4P47928 161 aa24.05■■□□□ 1.44
SNF8-216ENST00000573795 FOXK2Q01167 660 aa24.05■■□□□ 1.44
SNF8-216ENST00000573795 PFKPQ01813 784 aa24.05■■□□□ 1.44
SNF8-216ENST00000573795 SLC10A6Q3KNW5 377 aa24.05■■□□□ 1.44
SNF8-216ENST00000573795 SEZ6Q53EL9 994 aa24.05■■□□□ 1.44
SNF8-216ENST00000573795 HYIQ5T013 277 aa24.05■■□□□ 1.44
SNF8-216ENST00000573795 DTHD1Q6ZMT9 781 aa24.05■■□□□ 1.44
SNF8-216ENST00000573795 TCEAL8Q8IYN2 117 aa24.05■■□□□ 1.44
SNF8-216ENST00000573795 TMEM161BQ8NDZ6 487 aa24.05■■□□□ 1.44
SNF8-216ENST00000573795 TCEAL4Q96EI5 215 aa24.05■■□□□ 1.44
SNF8-216ENST00000573795 LRG1P02750 347 aa24.04■■□□□ 1.44
SNF8-216ENST00000573795 PTPN2P17706 415 aa24.04■■□□□ 1.44
SNF8-216ENST00000573795 RPL9P32969 192 aaKnown RBP24.04■■□□□ 1.44
SNF8-216ENST00000573795 CCR2P41597 374 aa24.04■■□□□ 1.44
SNF8-216ENST00000573795 ARPP19P56211 112 aa24.04■■□□□ 1.44
SNF8-216ENST00000573795 RAD51AP2Q09MP3 1159 aa24.04■■□□□ 1.44
SNF8-216ENST00000573795 UBXN2BQ14CS0 331 aa24.04■■□□□ 1.44
SNF8-216ENST00000573795 TANGO2Q6ICL3 276 aa24.04■■□□□ 1.44
SNF8-216ENST00000573795 SPIRE2Q8WWL2 714 aa24.04■■□□□ 1.44
SNF8-216ENST00000573795 SUSD3Q96L08 255 aa24.04■■□□□ 1.44
SNF8-216ENST00000573795 TCHPQ9BT92 498 aa24.04■■□□□ 1.44
SNF8-216ENST00000573795 OSBPL6Q9BZF3 934 aa24.04■■□□□ 1.44
SNF8-216ENST00000573795 HAPLN2Q9GZV7 340 aa24.04■■□□□ 1.44
SNF8-216ENST00000573795 TUBGCP4Q9UGJ1 667 aa24.04■■□□□ 1.44
SNF8-216ENST00000573795 INSL5Q9Y5Q6 135 aa24.04■■□□□ 1.44
SNF8-216ENST00000573795 FAM170BA6NMN3 283 aa24.03■■□□□ 1.44
SNF8-216ENST00000573795 PRRG1O14668 218 aa24.03■■□□□ 1.44
SNF8-216ENST00000573795 TOM1L1O75674 476 aa24.03■■□□□ 1.44
SNF8-216ENST00000573795 MAPTP10636 758 aaKnown RBP24.03■■□□□ 1.44
SNF8-216ENST00000573795 ATP2C1P98194 919 aaPredicted RBP24.03■■□□□ 1.44
SNF8-216ENST00000573795 NOLC1Q14978 699 aaKnown RBP eCLIP24.03■■□□□ 1.44
SNF8-216ENST00000573795 ZC3H14Q6PJT7 736 aaKnown RBP24.03■■□□□ 1.44
SNF8-216ENST00000573795 CORO1BQ9BR76 489 aa24.03■■□□□ 1.44
SNF8-216ENST00000573795 TIPINQ9BVW5 301 aa24.03■■□□□ 1.44
SNF8-216ENST00000573795 CYP4F11Q9HBI6 524 aa24.03■■□□□ 1.44
SNF8-216ENST00000573795 ANKFY1Q9P2R3 1169 aa24.03■■□□□ 1.44
SNF8-216ENST00000573795 NUB1Q9Y5A7 615 aa24.03■■□□□ 1.44
SNF8-216ENST00000573795 H7C4K7 107 aa24.02■■□□□ 1.44
SNF8-216ENST00000573795 PLS3P13797 630 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms