RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 AFMIDQ63HM1 303 aa6.16□□□□□ -1.42
CDC27-215ENST00000573550 TUBA3EQ6PEY2 450 aa6.16□□□□□ -1.42
CDC27-215ENST00000573550 SYT12Q8IV01 421 aa6.16□□□□□ -1.42
CDC27-215ENST00000573550 CASKIN2Q8WXE0 1202 aa6.16□□□□□ -1.42
CDC27-215ENST00000573550 DPF2Q92785 391 aa6.16□□□□□ -1.42
CDC27-215ENST00000573550 NDC1Q9BTX1 674 aa6.16□□□□□ -1.42
CDC27-215ENST00000573550 SENP6Q9GZR1 1112 aaPredicted RBP6.16□□□□□ -1.42
CDC27-215ENST00000573550 CSRNP2Q9H175 543 aa6.16□□□□□ -1.42
CDC27-215ENST00000573550 AJAP1Q9UKB5 411 aaPredicted RBP6.16□□□□□ -1.42
CDC27-215ENST00000573550 INTUQ9ULD6 942 aa6.16□□□□□ -1.42
CDC27-215ENST00000573550 CLCA2Q9UQC9 943 aa6.16□□□□□ -1.42
CDC27-215ENST00000573550 MRFAP1Q9Y605 127 aa6.16□□□□□ -1.42
CDC27-215ENST00000573550 MADDQ8WXG6 1647 aa6.16□□□□□ -1.42
CDC27-215ENST00000573550 TET3O43151 1660 aa6.16□□□□□ -1.42
CDC27-215ENST00000573550 PARD3Q8TEW0 1356 aa6.16□□□□□ -1.42
CDC27-215ENST00000573550 A2MP01023 1474 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 SYNMO15061 1565 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 VWDEQ8N2E2 1590 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 INO80Q9ULG1 1556 aaPredicted RBP6.15□□□□□ -1.42
CDC27-215ENST00000573550 ZCCHC11Q5TAX3 1644 aaKnown RBP6.15□□□□□ -1.42
CDC27-215ENST00000573550 hCG_2014768A0A024R1R8 64 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 NPIPB8E9PQR5 432 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 LEFTY2O00292 366 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 TRIM24O15164 1050 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 FAM20BO75063 409 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 AMY1AP04745 511 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 TSPY4P0CV99 314 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 TSPY10P0CW01 314 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 IL2RBP14784 551 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 PCSK1P29120 753 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 APOBEC3AP31941 199 aaPredicted RBP6.15□□□□□ -1.42
CDC27-215ENST00000573550 ALDH1A3P47895 512 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 CLRN1P58418 232 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 EXOSC10Q01780 885 aaKnown RBP6.15□□□□□ -1.42
CDC27-215ENST00000573550 LSM12Q3MHD2 195 aaKnown RBP6.15□□□□□ -1.42
CDC27-215ENST00000573550 ZGPATQ8N5A5 531 aaKnown RBP6.15□□□□□ -1.42
CDC27-215ENST00000573550 RNF169Q8NCN4 708 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 OR10H5Q8NGA6 315 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 STAG1Q8WVM7 1258 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 TFAP2CQ92754 450 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 KRTAP4-2Q9BYR5 136 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 SPON1Q9HCB6 807 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 SORCS3Q9UPU3 1222 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 NUDCQ9Y266 331 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 SPEF1Q9Y4P9 236 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 IPPQ9Y573 584 aa6.15□□□□□ -1.42
CDC27-215ENST00000573550 PNPLA7Q6ZV29 1317 aa6.15□□□□□ -1.43
CDC27-215ENST00000573550 MYBBP1AQ9BQG0 1328 aaKnown RBP6.15□□□□□ -1.43
CDC27-215ENST00000573550 RTEL1-TNFRSF6BF6WH68 1400 aa6.15□□□□□ -1.43
CDC27-215ENST00000573550 ZFYVE16Q7Z3T8 1539 aa6.15□□□□□ -1.43
CDC27-215ENST00000573550 NARSO43776 548 aaKnown RBP6.14□□□□□ -1.43
CDC27-215ENST00000573550 ZRANB2O95218 330 aaKnown RBP eCLIP6.14□□□□□ -1.43
CDC27-215ENST00000573550 PEX11BO96011 259 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 SNRPA1P09661 255 aaKnown RBP6.14□□□□□ -1.43
CDC27-215ENST00000573550 NR4A1P22736 598 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 EDNRBP24530 442 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 SLC16A1P53985 500 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 ATP8B2P98198 1209 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 MTM1Q13496 603 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 EFCAB12Q6NXP0 572 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 PNMA8AQ86V59 439 aaPredicted RBP6.14□□□□□ -1.43
CDC27-215ENST00000573550 CCHCR1Q8TD31 782 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 STON2Q8WXE9 905 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 CYFIP2Q96F07 1278 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 C7orf25Q9BPX7 421 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 ZNF341Q9BYN7 854 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 MANSC1Q9H8J5 431 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 TMEM140Q9NV12 185 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 TYW1Q9NV66 732 aaKnown RBP6.14□□□□□ -1.43
CDC27-215ENST00000573550 MOCS1Q9NZB8 636 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 SLC23A1Q9UHI7 598 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 SERPINB13Q9UIV8 391 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 LIMCH1Q9UPQ0 1083 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 CHST2Q9Y4C5 530 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 ACTL7AQ9Y615 435 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 BLMP54132 1417 aaPredicted RBP6.14□□□□□ -1.43
CDC27-215ENST00000573550 PLA2R1Q13018 1463 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 ABCA9Q8IUA7 1624 aa6.14□□□□□ -1.43
CDC27-215ENST00000573550 AHRRA9YTQ3 701 aa6.13□□□□□ -1.43
CDC27-215ENST00000573550 HTRA2O43464 458 aaPredicted RBP6.13□□□□□ -1.43
CDC27-215ENST00000573550 GPR32O75388 356 aa6.13□□□□□ -1.43
CDC27-215ENST00000573550 MGAT1P26572 445 aa6.13□□□□□ -1.43
CDC27-215ENST00000573550 ANAPC15P60006 121 aa6.13□□□□□ -1.43
CDC27-215ENST00000573550 RRP12Q5JTH9 1297 aaKnown RBP6.13□□□□□ -1.43
CDC27-215ENST00000573550 EFCAB2Q5VUJ9 269 aa6.13□□□□□ -1.43
CDC27-215ENST00000573550 OTUD7BQ6GQQ9 843 aa6.13□□□□□ -1.43
CDC27-215ENST00000573550 ZFP28Q8NHY6 868 aa6.13□□□□□ -1.43
CDC27-215ENST00000573550 CPT1CQ8TCG5 803 aa6.13□□□□□ -1.43
CDC27-215ENST00000573550 COA7Q96BR5 231 aa6.13□□□□□ -1.43
CDC27-215ENST00000573550 NEU1Q99519 415 aa6.13□□□□□ -1.43
CDC27-215ENST00000573550 MRI1Q9BV20 369 aa6.13□□□□□ -1.43
CDC27-215ENST00000573550 GPRC5BQ9NZH0 403 aa6.13□□□□□ -1.43
CDC27-215ENST00000573550 SAP30BPQ9UHR5 308 aaKnown RBP6.13□□□□□ -1.43
CDC27-215ENST00000573550 PLCH2O75038 1416 aa6.13□□□□□ -1.43
CDC27-215ENST00000573550 SCAPERQ9BY12 1400 aa6.13□□□□□ -1.43
CDC27-215ENST00000573550 FZD7O75084 574 aa6.12□□□□□ -1.43
CDC27-215ENST00000573550 SCAF4O95104 1147 aaKnown RBP6.12□□□□□ -1.43
CDC27-215ENST00000573550 ZNF202O95125 648 aa6.12□□□□□ -1.43
CDC27-215ENST00000573550 RAP2AP10114 183 aa6.12□□□□□ -1.43
CDC27-215ENST00000573550 ZSCAN20P17040 1043 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms