RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.48□□□□□ -0.89
SMG6-210ENST00000572205 A0A1B0GVL5 298 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 A0A1W2PQ27 194 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 A0A1W2PQ64 194 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 A0A1W2PQD8 194 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 CARNS1A5YM72 827 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 H0YCG3 227 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 OGTO15294 1046 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 TEX28O15482 410 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 ADAM12O43184 909 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 TGFB1I1O43294 461 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 TBC1D4O60343 1298 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 THP07101 528 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 GAP43P17677 238 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 FGFR3P22607 806 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 CMA1P23946 247 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 LRPAP1P30533 357 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 TXLNAP40222 546 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 OR1G1P47890 313 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 ME1P48163 572 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 GUCY2FP51841 1108 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 NDUFA8P51970 172 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 SMTNP53814 917 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 KRT85P78386 507 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 SMAD4Q13485 552 aaKnown RBP9.48□□□□□ -0.89
SMG6-210ENST00000572205 CLUL1Q15846 466 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 BMT2Q1RMZ1 405 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 ADALQ6DHV7 355 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 PTCRAQ6ISU1 281 aaPredicted RBP9.48□□□□□ -0.89
SMG6-210ENST00000572205 ANKRD54Q6NXT1 300 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 GPR65Q8IYL9 337 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 HACE1Q8IYU2 909 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 KIAA0895Q8NCT3 520 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 RASSF8Q8NHQ8 419 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 SCFD1Q8WVM8 642 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 KLHL5Q96PQ7 755 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 RPS6KC1Q96S38 1066 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 TLE6Q9H808 572 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 MAGEF1Q9HAY2 307 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 TBC1D7Q9P0N9 293 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 CFAP45Q9UL16 551 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 KCNH3Q9ULD8 1083 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 FAN1Q9Y2M0 1017 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 COL4A3Q01955 1670 aa9.48□□□□□ -0.89
SMG6-210ENST00000572205 NUP210Q8TEM1 1887 aaPredicted RBP9.47□□□□□ -0.89
SMG6-210ENST00000572205 I3L4J1 428 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 CLDN3O15551 220 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 NCK2O43639 380 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 NFICP08651 508 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 SLFN14P0C7P3 912 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 HARSP12081 509 aaKnown RBP9.47□□□□□ -0.89
SMG6-210ENST00000572205 GLUD2P49448 558 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 LIG4P49917 911 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 KRT17Q04695 432 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 SPAG1Q07617 926 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 NCBP1Q09161 790 aaKnown RBP9.47□□□□□ -0.89
SMG6-210ENST00000572205 STRN3Q13033 797 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 SNW1Q13573 536 aaKnown RBP9.47□□□□□ -0.89
SMG6-210ENST00000572205 KANK3Q6NY19 840 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 LILRA6Q6PI73 481 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 PRSS55Q6UWB4 352 aaPredicted RBP9.47□□□□□ -0.89
SMG6-210ENST00000572205 UNC13DQ70J99 1090 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 TMC7Q7Z402 723 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 IQUBQ8NA54 791 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 ENGASEQ8NFI3 743 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 LNX1Q8TBB1 728 aaPredicted RBP9.47□□□□□ -0.89
SMG6-210ENST00000572205 PIK3R5Q8WYR1 880 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 UHRF1Q96T88 793 aaPredicted RBP9.47□□□□□ -0.89
SMG6-210ENST00000572205 CBWD1Q9BRT8 395 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 CCDC94Q9BW85 323 aaPredicted RBP9.47□□□□□ -0.89
SMG6-210ENST00000572205 BLZF1Q9H2G9 400 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 IGFLR1Q9H665 355 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 PANK4Q9NVE7 773 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 SERTAD1Q9UHV2 236 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 CD207Q9UJ71 328 aa9.47□□□□□ -0.89
SMG6-210ENST00000572205 USP15Q9Y4E8 981 aaPredicted RBP9.47□□□□□ -0.89
SMG6-210ENST00000572205 SF3B1O75533 1304 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMG6-210ENST00000572205 LACTBL1A8MY62 500 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 PODXLO00592 558 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 SPTLC1O15269 473 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 EIF3DO15371 548 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMG6-210ENST00000572205 PRPF6O94906 941 aaKnown RBP9.46□□□□□ -0.9
SMG6-210ENST00000572205 VNN2O95498 520 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 ALDH2P05091 517 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 KRT18P05783 430 aaKnown RBP9.46□□□□□ -0.9
SMG6-210ENST00000572205 CLTAP09496 248 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 RPL17P18621 184 aaKnown RBP9.46□□□□□ -0.9
SMG6-210ENST00000572205 TKTP29401 623 aaKnown RBP9.46□□□□□ -0.9
SMG6-210ENST00000572205 BRCC3P46736 316 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 NDUFV1P49821 464 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 MRPL58Q14197 206 aaKnown RBP9.46□□□□□ -0.9
SMG6-210ENST00000572205 CBX2Q14781 532 aaPredicted RBP9.46□□□□□ -0.9
SMG6-210ENST00000572205 BRSK2Q8IWQ3 736 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 FMR1NBQ8N0W7 255 aaPredicted RBP9.46□□□□□ -0.9
SMG6-210ENST00000572205 ZNF507Q8TCN5 953 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 ZNF707Q96C28 371 aaPredicted RBP9.46□□□□□ -0.9
SMG6-210ENST00000572205 PAGE5Q96GU1 130 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 SPATA32Q96LK8 384 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 FBXL18Q96ME1 805 aa9.46□□□□□ -0.9
SMG6-210ENST00000572205 ACAP3Q96P50 834 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms