RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 HVCN1Q96D96 273 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 FAM212AQ96EL1 285 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 KIF12Q96FN5 646 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 PAGE5Q96GU1 130 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 FAM84AQ96KN4 292 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 FBXL18Q96ME1 805 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 ACCSQ96QU6 501 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 CLSTN3Q9BQT9 956 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 TTPALQ9BTX7 342 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 GOLPH3LQ9H4A5 285 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 RPF1Q9H9Y2 349 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 PLEKHA5Q9HAU0 1116 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 STK39Q9UEW8 545 aa11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 AGO2Q9UKV8 859 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-213ENST00000571886 MYO10Q9HD67 2058 aa11.15□□□□□ -0.63
GTF3C1-213ENST00000571886 FSD2A1L4K1 749 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 GOLGA8IPA6NC78 632 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 GOLGA8JA6NMD2 632 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 TGM5O43548 720 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 KLRC4O43908 158 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 NFICP08651 508 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 HOXB8P17481 243 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 SP100P23497 879 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 NDUFA8P51970 172 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 JADE1Q6IE81 842 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 SLFN12LQ6IEE8 588 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 TMC5Q6UXY8 1006 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 UNC13DQ70J99 1090 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 EPM2AIP1Q7L775 607 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 PPFIBP1Q86W92 1011 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 PIK3R5Q8WYR1 880 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 POMGNT1Q8WZA1 660 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 SAAL1Q96ER3 474 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 DDX27Q96GQ7 796 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 UROC1Q96N76 676 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 CBWD1Q9BRT8 395 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 ADAM7Q9H2U9 754 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 PCIF1Q9H4Z3 704 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 POMKQ9H5K3 350 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 SLC38A7Q9NVC3 462 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 FNIP2Q9P278 1114 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 SSX2IPQ9Y2D8 614 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 PCDHB13Q9Y5F0 798 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 NCOR1O75376 2440 aa11.14□□□□□ -0.63
GTF3C1-213ENST00000571886 FAM237AA0A1B0GTK4 181 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 LOC730098B7Z3J9 87 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 RFPL2O75678 378 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 ADH1AP07327 375 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 SLFN14P0C7P3 912 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 PRR29P0C7W0 189 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 LRPAP1P30533 357 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 SSTR3P32745 418 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 RPL9P32969 192 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 AMPD3Q01432 767 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 PPP2R3AQ06190 1150 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 CBX2Q14781 532 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 PSMD5Q16401 504 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 SPATA1Q5VX52 437 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 EFCAB13Q8IY85 973 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 GPR65Q8IYL9 337 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 ZNF507Q8TCN5 953 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 RPGRIP1Q96KN7 1286 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 FAM213AQ9BRX8 229 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 PHF7Q9BWX1 381 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 LRRC27Q9C0I9 530 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 SLC39A2Q9NP94 309 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 MAN1C1Q9NR34 630 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 PRKAG3Q9UGI9 489 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 EXOC7Q9UPT5 735 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 FAM50BQ9Y247 325 aa11.13□□□□□ -0.63
GTF3C1-213ENST00000571886 TGFB1I1O43294 461 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 TBC1D4O60343 1298 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 GLUD1P00367 558 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 SRGAP2BP0DMP2 458 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 ABCD1P33897 745 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 OR1D2P34982 312 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 ELAVL2Q12926 359 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 MRPL58Q14197 206 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 POSTNQ15063 836 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 KYAT1Q16773 422 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 KMT5BQ4FZB7 885 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 FAM26FQ5R3K3 315 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 NELFCDQ8IXH7 590 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 CEP57L1Q8IYX8 460 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 SYCP3Q8IZU3 236 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 FSIP1Q8NA03 581 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 SCFD1Q8WVM8 642 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 SCAND2PQ9GZW5 306 aaPredicted RBP11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 MAGEF1Q9HAY2 307 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 MTRRQ9UBK8 725 aa11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 UBQLN1Q9UMX0 589 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-213ENST00000571886 DENND4AQ7Z401 1863 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 CCDC195A0A1B0GUA6 201 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 PVALEFA0A1B0GWK0 134 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 A0A1W2PQ27 194 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 A0A1W2PQ64 194 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 A0A1W2PQD8 194 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 TULP1O00294 542 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms