RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 CCDC186Q7Z3E2 898 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 ZNF598Q86UK7 904 aaKnown RBP12.85□□□□□ -0.35
CDRT1-206ENST00000571263 RTN4RL1Q86UN2 441 aaPredicted RBP12.85□□□□□ -0.35
CDRT1-206ENST00000571263 EFCAB13Q8IY85 973 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 LRRC52Q8N7C0 313 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 OR5B17Q8NGF7 314 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 URGCPQ8TCY9 931 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 TAS1R2Q8TE23 839 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 DDX27Q96GQ7 796 aaKnown RBP12.85□□□□□ -0.35
CDRT1-206ENST00000571263 SCLYQ96I15 445 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 UROC1Q96N76 676 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 PANX2Q96RD6 677 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 NAA15Q9BXJ9 866 aaKnown RBP12.85□□□□□ -0.35
CDRT1-206ENST00000571263 TTYH3Q9C0H2 523 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 MTMR12Q9C0I1 747 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 DNAI2Q9GZS0 605 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 VRTNQ9H8Y1 702 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 PRDM5Q9NQX1 630 aaPredicted RBP12.85□□□□□ -0.35
CDRT1-206ENST00000571263 HES2Q9Y543 173 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 UMODL1Q5DID0 1318 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 CARNS1A5YM72 827 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 MFAP3LO75121 409 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 ASS1P00966 412 aaKnown RBP12.84□□□□□ -0.35
CDRT1-206ENST00000571263 GYPCP04921 128 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 NFICP08651 508 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 FAM163BP0C2L3 166 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 LRPAP1P30533 357 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 KRT9P35527 623 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 WNT7BP56706 349 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 POLR2FP61218 127 aaKnown RBP12.84□□□□□ -0.35
CDRT1-206ENST00000571263 YWHAEP62258 255 aaKnown RBP12.84□□□□□ -0.35
CDRT1-206ENST00000571263 GRIK3Q13003 919 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 AGMOQ6ZNB7 445 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 CPLX3Q8WVH0 158 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 ZNF560Q96MR9 790 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 SPAG5Q96R06 1193 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 OSBPL7Q9BZF2 842 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 GANQ9H2C0 597 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 DNAJC12Q9UKB3 198 aa12.84□□□□□ -0.35
CDRT1-206ENST00000571263 BZW2Q9Y6E2 419 aaKnown RBP12.84□□□□□ -0.35
CDRT1-206ENST00000571263 TANC1Q9C0D5 1861 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 TRIM43BA6NCK2 446 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 ARL5CA6NH57 179 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 NOL4O94818 638 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 CST3P01034 146 aaPredicted RBP12.83□□□□□ -0.36
CDRT1-206ENST00000571263 KRT19P08727 400 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 HNRNPH3P31942 346 aaKnown RBP12.83□□□□□ -0.36
CDRT1-206ENST00000571263 STAT1P42224 750 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 CDK17Q00537 523 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 ZNF667Q5HYK9 610 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 SFMBT2Q5VUG0 894 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 LMBRD2Q68DH5 695 aaPredicted RBP12.83□□□□□ -0.36
CDRT1-206ENST00000571263 DPY19L2P1Q6NXN4 242 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 NPAS4Q8IUM7 802 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 LRRC8AQ8IWT6 810 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 ABI1Q8IZP0 508 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 C1orf127Q8N9H9 656 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 TRIM43Q96BQ3 446 aaPredicted RBP12.83□□□□□ -0.36
CDRT1-206ENST00000571263 ABHD8Q96I13 439 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 PPP1R10Q96QC0 940 aaKnown RBP12.83□□□□□ -0.36
CDRT1-206ENST00000571263 GAD1Q99259 594 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 DNAJC7Q99615 494 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 CYP3A43Q9HB55 503 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 SIX2Q9NPC8 291 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 UBE2TQ9NPD8 197 aaPredicted RBP12.83□□□□□ -0.36
CDRT1-206ENST00000571263 IL23AQ9NPF7 189 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 ABHD10Q9NUJ1 306 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 AIPL1Q9NZN9 384 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 KLK14Q9P0G3 267 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 PLAGL2Q9UPG8 496 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 AGAP1Q9UPQ3 857 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 PTPRJQ12913 1337 aa12.83□□□□□ -0.36
CDRT1-206ENST00000571263 RALGAPA2Q2PPJ7 1873 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 ARHGEF37A1IGU5 675 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 PIRO00625 290 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 MEFVO15553 781 aaPredicted RBP12.82□□□□□ -0.36
CDRT1-206ENST00000571263 EVI5O60447 810 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 OFD1O75665 1012 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 VNN1O95497 513 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 AMHP03971 560 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 ITGB3P05106 788 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 FERP16591 822 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 MLH1P40692 756 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 KLK7P49862 253 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 FXR1P51114 621 aaKnown RBP eCLIP12.82□□□□□ -0.36
CDRT1-206ENST00000571263 BPIFB4P59827 614 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 NOP14P78316 857 aaKnown RBP12.82□□□□□ -0.36
CDRT1-206ENST00000571263 ZNF699Q32M78 642 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 PHLDB3Q6NSJ2 640 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 RRAGAQ7L523 313 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 DEFB128Q7Z7B8 93 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 TMTC1Q8IUR5 882 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 TC2NQ8N9U0 490 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 RNF169Q8NCN4 708 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 LINC01599Q8WXQ3 324 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 SEMA4DQ92854 862 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 HPDLQ96IR7 371 aa12.82□□□□□ -0.36
CDRT1-206ENST00000571263 ZMAT2Q96NC0 199 aaKnown RBP12.82□□□□□ -0.36
CDRT1-206ENST00000571263 MRPL9Q9BYD2 267 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms