RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 MRPS17Q9Y2R5 130 aaKnown RBP15.73■□□□□ 0.11
CIITA-205ENST00000571186 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.73■□□□□ 0.11
CIITA-205ENST00000571186 BACE2Q9Y5Z0 518 aa15.73■□□□□ 0.11
CIITA-205ENST00000571186 EPG5Q9HCE0 2579 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 H3BQV1 296 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 PRRG1O14668 218 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 LRG1P02750 347 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 BRCC3P46736 316 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 UPP1Q16831 310 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 SLC5A9Q2M3M2 681 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 TTC38Q5R3I4 469 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 ATF7IP2Q5U623 682 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 CD300LGQ6UXG3 332 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 GPR161Q8N6U8 529 aaKnown RBP15.72■□□□□ 0.11
CIITA-205ENST00000571186 ZBTB44Q8NCP5 570 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 ERMNQ8TAM6 284 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 DDX27Q96GQ7 796 aaKnown RBP15.72■□□□□ 0.11
CIITA-205ENST00000571186 UROC1Q96N76 676 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 PPP1R10Q96QC0 940 aaKnown RBP15.72■□□□□ 0.11
CIITA-205ENST00000571186 KIFC3Q9BVG8 833 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 KIF3AQ9Y496 699 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 TICRRQ7Z2Z1 1910 aa15.72■□□□□ 0.11
CIITA-205ENST00000571186 ACACBO00763 2458 aa15.71■□□□□ 0.11
CIITA-205ENST00000571186 CEBPBP17676 345 aa15.71■□□□□ 0.11
CIITA-205ENST00000571186 SDHBP21912 280 aa15.71■□□□□ 0.11
CIITA-205ENST00000571186 RPA1P27694 616 aa15.71■□□□□ 0.11
CIITA-205ENST00000571186 RPS9P46781 194 aaKnown RBP15.71■□□□□ 0.11
CIITA-205ENST00000571186 EFNA5P52803 228 aa15.71■□□□□ 0.11
CIITA-205ENST00000571186 ARPP19P56211 112 aa15.71■□□□□ 0.11
CIITA-205ENST00000571186 ADCY1Q08828 1119 aa15.71■□□□□ 0.11
CIITA-205ENST00000571186 NT5DC1Q5TFE4 455 aa15.71■□□□□ 0.11
CIITA-205ENST00000571186 LARP1BQ659C4 914 aaKnown RBP15.71■□□□□ 0.11
CIITA-205ENST00000571186 APBB1IPQ7Z5R6 666 aaPredicted RBP15.71■□□□□ 0.11
CIITA-205ENST00000571186 C3orf58Q8NDZ4 430 aa15.71■□□□□ 0.11
CIITA-205ENST00000571186 ZNF461Q8TAF7 563 aa15.71■□□□□ 0.11
CIITA-205ENST00000571186 ELSPBP1Q96BH3 223 aa15.71■□□□□ 0.11
CIITA-205ENST00000571186 CORO1BQ9BR76 489 aa15.71■□□□□ 0.11
CIITA-205ENST00000571186 BRD9Q9H8M2 597 aa15.71■□□□□ 0.11
CIITA-205ENST00000571186 NDRG2Q9UN36 371 aaKnown RBP15.71■□□□□ 0.11
CIITA-205ENST00000571186 SMG5Q9UPR3 1016 aaKnown RBP15.71■□□□□ 0.11
CIITA-205ENST00000571186 PCDHB6Q9Y5E3 794 aa15.71■□□□□ 0.11
CIITA-205ENST00000571186 MYH11P35749 1972 aa15.71■□□□□ 0.1
CIITA-205ENST00000571186 PDCD11Q14690 1871 aaKnown RBP15.7■□□□□ 0.1
CIITA-205ENST00000571186 SMIM28A0A1B0GU29 152 aa15.7■□□□□ 0.1
CIITA-205ENST00000571186 K7ELQ4 463 aaPredicted RBP15.7■□□□□ 0.1
CIITA-205ENST00000571186 K7ERI5 159 aa15.7■□□□□ 0.1
CIITA-205ENST00000571186 OSTNP61366 133 aa15.7■□□□□ 0.1
CIITA-205ENST00000571186 ROR1Q01973 937 aa15.7■□□□□ 0.1
CIITA-205ENST00000571186 MTAPQ13126 283 aa15.7■□□□□ 0.1
CIITA-205ENST00000571186 GRM2Q14416 872 aa15.7■□□□□ 0.1
CIITA-205ENST00000571186 POTEHQ6S545 545 aa15.7■□□□□ 0.1
CIITA-205ENST00000571186 C4orf32Q8N8J7 132 aa15.7■□□□□ 0.1
CIITA-205ENST00000571186 ZFP14Q9HCL3 533 aa15.7■□□□□ 0.1
CIITA-205ENST00000571186 AVENQ9NQS1 362 aaPredicted RBP15.7■□□□□ 0.1
CIITA-205ENST00000571186 USP18Q9UMW8 372 aa15.7■□□□□ 0.1
CIITA-205ENST00000571186 NOL7Q9UMY1 257 aaKnown RBP15.7■□□□□ 0.1
CIITA-205ENST00000571186 SDK1Q7Z5N4 2213 aa15.7■□□□□ 0.1
CIITA-205ENST00000571186 ARHGEF37A1IGU5 675 aa15.69■□□□□ 0.1
CIITA-205ENST00000571186 ZNF197O14709 1029 aa15.69■□□□□ 0.1
CIITA-205ENST00000571186 TBC1D4O60343 1298 aa15.69■□□□□ 0.1
CIITA-205ENST00000571186 LILRB5O75023 590 aa15.69■□□□□ 0.1
CIITA-205ENST00000571186 ABLIM3O94929 683 aa15.69■□□□□ 0.1
CIITA-205ENST00000571186 ATXN1P54253 815 aaKnown RBP15.69■□□□□ 0.1
CIITA-205ENST00000571186 YARSP54577 528 aaKnown RBP15.69■□□□□ 0.1
CIITA-205ENST00000571186 SOX4Q06945 474 aaPredicted RBP15.69■□□□□ 0.1
CIITA-205ENST00000571186 FZD5Q13467 585 aa15.69■□□□□ 0.1
CIITA-205ENST00000571186 NELL1Q92832 810 aa15.69■□□□□ 0.1
CIITA-205ENST00000571186 KIFAP3Q92845 792 aa15.69■□□□□ 0.1
CIITA-205ENST00000571186 TCEAL4Q96EI5 215 aa15.69■□□□□ 0.1
CIITA-205ENST00000571186 TRMT61BQ9BVS5 477 aaKnown RBP15.69■□□□□ 0.1
CIITA-205ENST00000571186 CCDC94Q9BW85 323 aaPredicted RBP15.69■□□□□ 0.1
CIITA-205ENST00000571186 EPC1Q9H2F5 836 aa15.69■□□□□ 0.1
CIITA-205ENST00000571186 CYP4F11Q9HBI6 524 aa15.69■□□□□ 0.1
CIITA-205ENST00000571186 DAXXQ9UER7 740 aaPredicted RBP15.69■□□□□ 0.1
CIITA-205ENST00000571186 CDV3Q9UKY7 258 aaKnown RBP15.69■□□□□ 0.1
CIITA-205ENST00000571186 WDR27A2RRH5 827 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 CCDC169A6NNP5 214 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 PRR5-ARHGAP8B1AHC4 643 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 MAN2B1O00754 1011 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 OR52Z1P0C646 297 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 ATF2P15336 505 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 CCT6AP40227 531 aaKnown RBP15.68■□□□□ 0.1
CIITA-205ENST00000571186 TRAPPC10P48553 1259 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 ARHGAP8P85298 464 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 FAM78AQ5JUQ0 283 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 SLC8B1Q6J4K2 584 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 CEP120Q8N960 986 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 DNASE1L2Q92874 299 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 CNTNAP3BQ96NU0 1288 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 FAM126AQ9BYI3 521 aaPredicted RBP15.68■□□□□ 0.1
CIITA-205ENST00000571186 CNTNAP3Q9BZ76 1288 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 PRMT8Q9NR22 394 aaPredicted RBP15.68■□□□□ 0.1
CIITA-205ENST00000571186 TOPORSQ9NS56 1045 aaPredicted RBP15.68■□□□□ 0.1
CIITA-205ENST00000571186 SLC38A7Q9NVC3 462 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 TNFSF13BQ9Y275 285 aa15.68■□□□□ 0.1
CIITA-205ENST00000571186 VPS37CA5D8V6 355 aaPredicted RBP15.67■□□□□ 0.1
CIITA-205ENST00000571186 SHISA7A6NL88 538 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 H7C4K7 107 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 PODXLO00592 558 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 SEC24AO95486 1093 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms