RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 C1orf186Q6ZWK4 172 aa9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 MTSS1LQ765P7 747 aa9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 C1orf210Q8IVY1 113 aa9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 DCLK2Q8N568 766 aa9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 TCEAL4Q96EI5 215 aa9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 ZSCAN31Q96LW9 406 aaPredicted RBP9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 UROC1Q96N76 676 aa9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 HINFPQ9BQA5 517 aa9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 CORO1BQ9BR76 489 aa9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 MMTAG2Q9BU76 263 aaKnown RBP9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 RAB34Q9BZG1 259 aa9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 CYP4F11Q9HBI6 524 aa9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 PTPRHQ9HD43 1115 aa9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 TOPORSQ9NS56 1045 aaPredicted RBP9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 SPATA6Q9NWH7 488 aaPredicted RBP9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 ARHGAP28Q9P2N2 729 aa9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 NUB1Q9Y5A7 615 aa9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 BACE2Q9Y5Z0 518 aa9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 ZFP37Q9Y6Q3 630 aaPredicted RBP9.43□□□□□ -0.9
CTDNEP1-203ENST00000570385 NPHP3-ACAD11A0A0J9YXS1 232 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 KANSL1LA0AUZ9 987 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 WDR27A2RRH5 827 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 FAM170BA6NMN3 283 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 NRG2O14511 850 aaPredicted RBP9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 ABLIM1O14639 778 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 SEC24AO95486 1093 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 MCF2P10911 925 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 GJA1P17302 382 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 MCM4P33991 863 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 MATR3P43243 847 aaKnown RBP eCLIP9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 ID4P47928 161 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 STARD6P59095 220 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 GRM2Q14416 872 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 CTXN3Q4LDR2 81 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 XKR4Q5GH76 650 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 TANGO2Q6ICL3 276 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 MPZL3Q6UWV2 235 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 DTHD1Q6ZMT9 781 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 TPRG1Q6ZUI0 275 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 KIAA2013Q8IYS2 634 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 HS6ST3Q8IZP7 471 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 ZNF461Q8TAF7 563 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 SHDQ96IW2 340 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 DRC1Q96MC2 740 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 PNMA5Q96PV4 448 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 TMEM134Q9H6X4 195 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 SH2B1Q9NRF2 756 aaPredicted RBP9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 SLC38A7Q9NVC3 462 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 TUBGCP4Q9UGJ1 667 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 FBXL5Q9UKA1 691 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 KCNH3Q9ULD8 1083 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 TIMM13Q9Y5L4 95 aaPredicted RBP9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 CITO14578 2027 aa9.42□□□□□ -0.9
CTDNEP1-203ENST00000570385 MIA3Q5JRA6 1907 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 VWA3AA6NCI4 1184 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 EIF5BO60841 1220 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 ABLIM3O94929 683 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 KCNE1P15382 129 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 PTPN2P17706 415 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 PROZP22891 400 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 CCR2P41597 374 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 GUCY2FP51841 1108 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 CDR1P51861 262 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 CSTF1Q05048 431 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 ADCY1Q08828 1119 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 STRN3Q13033 797 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 DHX8Q14562 1220 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 SLC10A6Q3KNW5 377 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 SLC8B1Q6J4K2 584 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 TSSK4Q6SA08 328 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 GPIHBP1Q8IV16 184 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 MAML2Q8IZL2 1156 aaPredicted RBP9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 TBC1D32Q96NH3 1257 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 BCO2Q9BYV7 579 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 LTB4R2Q9NPC1 389 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 HEBP1Q9NRV9 189 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 CNTN3Q9P232 1028 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 RBM19Q9Y4C8 960 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 INSL5Q9Y5Q6 135 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 STK24Q9Y6E0 443 aa9.41□□□□□ -0.9
CTDNEP1-203ENST00000570385 DMDP11532 3685 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 ARHGEF37A1IGU5 675 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 H7C4K7 107 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 SYN3O14994 580 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 LAMTOR5O43504 91 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 TBC1D4O60343 1298 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 POU2F2P09086 479 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 OR4Q2P0C623 313 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 PLA2G4BP0C869 781 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 CXCL8P10145 99 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 MAPTP10636 758 aaKnown RBP9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 MYL4P12829 197 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 PLS3P13797 630 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 CPB1P15086 417 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 ATF2P15336 505 aa9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 TARSP26639 723 aaKnown RBP9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 MARCKSP29966 332 aaPredicted RBP9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 RPL9P32969 192 aaKnown RBP9.4□□□□□ -0.9
CTDNEP1-203ENST00000570385 PFKPQ01813 784 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms