RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 MYCT1Q8N699 235 aa18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 SNX21Q969T3 373 aa18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 KCNK12Q9HB15 430 aa18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 DUSP12Q9UNI6 340 aa18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 MTMR6Q9Y217 621 aa18.65■□□□□ 0.58
MAP1LC3B-208ENST00000570189 HNRNPDLO14979 420 aaKnown RBP18.64■□□□□ 0.57
MAP1LC3B-208ENST00000570189 OGTO15294 1046 aa18.64■□□□□ 0.57
MAP1LC3B-208ENST00000570189 LRPAP1P30533 357 aa18.64■□□□□ 0.57
MAP1LC3B-208ENST00000570189 OR1D2P34982 312 aa18.64■□□□□ 0.57
MAP1LC3B-208ENST00000570189 POU5F1Q01860 360 aaKnown RBP18.64■□□□□ 0.57
MAP1LC3B-208ENST00000570189 SLC39A14Q15043 492 aa18.64■□□□□ 0.57
MAP1LC3B-208ENST00000570189 EPSTI1Q96J88 318 aa18.64■□□□□ 0.57
MAP1LC3B-208ENST00000570189 SUSD3Q96L08 255 aa18.64■□□□□ 0.57
MAP1LC3B-208ENST00000570189 CCDC39Q9UFE4 941 aa18.64■□□□□ 0.57
MAP1LC3B-208ENST00000570189 A0A0B4J269 797 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 K7ENM7 598 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 STX6O43752 255 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 TBCAO75347 108 aaKnown RBP18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 ABLIM3O94929 683 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 C8AP07357 584 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 PDIA4P13667 645 aaKnown RBP18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 BRCC3P46736 316 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 NASPP49321 788 aaPredicted RBP18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 LIG4P49917 911 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 PPM1LQ5SGD2 360 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 RSPO2Q6UXX9 243 aaPredicted RBP18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 USP49Q70CQ1 688 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 RASSF8Q8NHQ8 419 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 ZNF461Q8TAF7 563 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 C18orf25Q96B23 403 aaPredicted RBP18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 HVCN1Q96D96 273 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 BICD1Q96G01 975 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 MYADMQ96S97 322 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 PIDD1Q9HB75 910 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 SEL1LQ9UBV2 794 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 MAFFQ9ULX9 164 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 CDY1Q9Y6F8 540 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 STYXL1Q9Y6J8 313 aa18.63■□□□□ 0.57
MAP1LC3B-208ENST00000570189 ARHGEF37A1IGU5 675 aa18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 ANHXE9PGG2 379 aa18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 H7C4K7 107 aa18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 XYLBO75191 536 aa18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 PPP1R37O75864 691 aa18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 KRT18P05783 430 aaKnown RBP18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 CXCL8P10145 99 aa18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 HARSP12081 509 aaKnown RBP18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 LAMP2P13473 410 aa18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 PAX3P23760 479 aa18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 MARCKSP29966 332 aaPredicted RBP18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 AVPR2P30518 371 aa18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 TXLNAP40222 546 aa18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 AARSP49588 968 aaKnown RBP eCLIP18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 NHLH1Q02575 133 aa18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 VARS2Q5ST30 1063 aaKnown RBP18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 AXDND1Q5T1B0 1012 aaPredicted RBP18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 SLC39A4Q6P5W5 647 aa18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 CD302Q8IX05 232 aa18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 KRI1Q8N9T8 703 aaKnown RBP18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 STRA6Q9BX79 667 aa18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 OXCT2Q9BYC2 517 aaPredicted RBP18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 AVENQ9NQS1 362 aaPredicted RBP18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 UBQLN1Q9UMX0 589 aaKnown RBP18.62■□□□□ 0.57
MAP1LC3B-208ENST00000570189 CACNA1HO95180 2353 aa18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 TSC2P49815 1807 aa18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 M0QZQ0 153 aa18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 XPOTO43592 962 aaKnown RBP18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 GBP2P32456 591 aaPredicted RBP18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 PTPN5P54829 565 aa18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 PPP2R3AQ06190 1150 aa18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 DHX8Q14562 1220 aaKnown RBP18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 TPGS2Q68CL5 300 aa18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 APPL2Q8NEU8 664 aa18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 PRSS33Q8NF86 280 aa18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 SLC7A14Q8TBB6 771 aa18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 USP28Q96RU2 1077 aa18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 SMOC2Q9H3U7 446 aa18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 CPSF3Q9UKF6 684 aaKnown RBP18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 KCNH3Q9ULD8 1083 aa18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 NUB1Q9Y5A7 615 aa18.61■□□□□ 0.57
MAP1LC3B-208ENST00000570189 FRMD3A2A2Y4 597 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 I3L4J1 428 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 PDGFBP01127 241 aaPredicted RBP18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 ATF2P15336 505 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 GAP43P17677 238 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 TNFSF9P41273 254 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 CLCN5P51795 746 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 VCPP55072 806 aaKnown RBP18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 ROR1Q01973 937 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 HTR4Q13639 388 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 ENOX2Q16206 610 aaKnown RBP18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 SEZ6Q53EL9 994 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 IER5LQ5T953 404 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 SLFN12LQ6IEE8 588 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 FAM173BQ6P4H8 233 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 ZNF720Q7Z2F6 126 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 TCEAL8Q8IYN2 117 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 DNAJC19Q96DA6 116 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 OLFML3Q9NRN5 406 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 WNT16Q9UBV4 365 aa18.6■□□□□ 0.57
MAP1LC3B-208ENST00000570189 TUBGCP4Q9UGJ1 667 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms