RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 CYP2J2P51589 502 aa10.68□□□□□ -0.7
GTF3C1-212ENST00000570129 YARSP54577 528 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-212ENST00000570129 MRPS5P82675 430 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-212ENST00000570129 EEF2KMTQ96G04 330 aa10.68□□□□□ -0.7
GTF3C1-212ENST00000570129 CLSTN3Q9BQT9 956 aa10.68□□□□□ -0.7
GTF3C1-212ENST00000570129 HERC2P3Q9BVR0 1158 aa10.68□□□□□ -0.7
GTF3C1-212ENST00000570129 S1PR5Q9H228 398 aa10.68□□□□□ -0.7
GTF3C1-212ENST00000570129 RPF1Q9H9Y2 349 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-212ENST00000570129 PDE11AQ9HCR9 933 aa10.68□□□□□ -0.7
GTF3C1-212ENST00000570129 PCDHB13Q9Y5F0 798 aa10.68□□□□□ -0.7
GTF3C1-212ENST00000570129 ATP6V1DQ9Y5K8 247 aa10.68□□□□□ -0.7
GTF3C1-212ENST00000570129 MYH11P35749 1972 aa10.68□□□□□ -0.7
GTF3C1-212ENST00000570129 TCF20Q9UGU0 1960 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-212ENST00000570129 PVALEFA0A1B0GWK0 134 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 H0YCG3 227 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 SOD2P04179 222 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 CASP4P49662 377 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 NDUFV1P49821 464 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 AMPD3Q01432 767 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 DSG1Q02413 1049 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 SMC1AQ14683 1233 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 CSPP1Q1MSJ5 1256 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 LEXMQ3ZCV2 418 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 DCLRE1AQ6PJP8 1040 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 ST13P5Q8NFI4 369 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 OR5B17Q8NGF7 314 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 CXorf38Q8TB03 319 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 LNX1Q8TBB1 728 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 ZNF516Q92618 1163 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 KCTD10Q9H3F6 313 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 NGRNQ9NPE2 291 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 AGPAT3Q9NRZ7 376 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 HSPBP1Q9NZL4 362 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 CIZ1Q9ULV3 898 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 HCFC2Q9Y5Z7 792 aa10.67□□□□□ -0.7
GTF3C1-212ENST00000570129 NRG2O14511 850 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 HCRTO43612 131 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 RFPL2O75678 378 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 BMP6P22004 513 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 FGFR3P22607 806 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 SP100P23497 879 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 KLRC2P26717 231 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 GLUD2P49448 558 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 CCDC142Q17RM4 750 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 RARS2Q5T160 578 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 PTCRAQ6ISU1 281 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 ANKRD54Q6NXT1 300 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 ADAMTS19Q8TE59 1207 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 ATXN2LQ8WWM7 1075 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 RSPH1Q8WYR4 309 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 BORCS6Q96GS4 357 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 TMEM209Q96SK2 561 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 RXFP1Q9HBX9 757 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 EXOC1Q9NV70 894 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 KCNG1Q9UIX4 513 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 PCDHA5Q9Y5H7 936 aa10.66□□□□□ -0.7
GTF3C1-212ENST00000570129 BIN1O00499 593 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 MBTPS2O43462 519 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 EXTL3O43909 919 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 LRRN2O75325 713 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 VNN2O95498 520 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 OR4Q2P0C623 313 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 CD44P16070 742 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 CLCN4P51793 760 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 PMS1P54277 932 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 ARPP19P56211 112 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 DLG4P78352 724 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 TFAMQ00059 246 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 FAM160A1Q05DH4 1040 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 PPP2R3AQ06190 1150 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 TMEM132DQ14C87 1099 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 POSTNQ15063 836 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 CAMK4Q16566 473 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 KNOP1Q1ED39 458 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 BMT2Q1RMZ1 405 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 USP41Q3LFD5 358 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 SPATA1Q5VX52 437 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 C9orf57Q5W0N0 161 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 SLFN12LQ6IEE8 588 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 ARMCX5Q6P1M9 558 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 LILRA6Q6PI73 481 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 TMC5Q6UXY8 1006 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 HVCN1Q96D96 273 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 DDX27Q96GQ7 796 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 LPIN3Q9BQK8 851 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 TTPALQ9BTX7 342 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 LRRC27Q9C0I9 530 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 PLEKHA5Q9HAU0 1116 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 MAGEF1Q9HAY2 307 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 MRPL17Q9NRX2 175 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 DPP3Q9NY33 737 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 SIX4Q9UIU6 781 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 CD207Q9UJ71 328 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 COG5Q9UP83 839 aa10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 USP15Q9Y4E8 981 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-212ENST00000570129 ANO9A1A5B4 782 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 GOLGA6L4A6NEF3 574 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 DLL1O00548 723 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 PIRO00625 290 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms