RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 RWDD2AQ9UIY3 292 aa14.14□□□□□ -0.15
CNOT1-217ENST00000569263 LAMA3Q16787 3333 aa14.14□□□□□ -0.15
CNOT1-217ENST00000569263 CHD9Q3L8U1 2897 aa14.14□□□□□ -0.15
CNOT1-217ENST00000569263 ATG2AQ2TAZ0 1938 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 RFXAPO00287 272 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 SLC16A3O15427 465 aaKnown RBP14.13□□□□□ -0.15
CNOT1-217ENST00000569263 TADA2AO75478 443 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 AKAP3O75969 853 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 CSPG5O95196 566 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 KIF4AO95239 1232 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 TNNC2P02585 160 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 RPL9P32969 192 aaKnown RBP14.13□□□□□ -0.15
CNOT1-217ENST00000569263 GUCY2FP51841 1108 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 PLCB3Q01970 1234 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 UBE3AQ05086 875 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 ZBTB6Q15916 424 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 UPP1Q16831 310 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 TPD52L1Q16890 204 aaPredicted RBP14.13□□□□□ -0.15
CNOT1-217ENST00000569263 SPATA1Q5VX52 437 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 LMBRD2Q68DH5 695 aaPredicted RBP14.13□□□□□ -0.15
CNOT1-217ENST00000569263 TTI2Q6NXR4 508 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 FOXR2Q6PJQ5 311 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 INTS8Q75QN2 995 aaKnown RBP14.13□□□□□ -0.15
CNOT1-217ENST00000569263 TMEM173Q86WV6 379 aaPredicted RBP14.13□□□□□ -0.15
CNOT1-217ENST00000569263 CSGALNACT2Q8N6G5 542 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 HASPINQ8TF76 798 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 BCL7CQ8WUZ0 217 aaPredicted RBP14.13□□□□□ -0.15
CNOT1-217ENST00000569263 CGRRF1Q99675 332 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 LMAN2LQ9H0V9 348 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 MARCH5Q9NX47 278 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 DPP3Q9NY33 737 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 ADAM28Q9UKQ2 775 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 R3HCC1Q9Y3T6 440 aaKnown RBP14.13□□□□□ -0.15
CNOT1-217ENST00000569263 NUB1Q9Y5A7 615 aa14.13□□□□□ -0.15
CNOT1-217ENST00000569263 MYO9BQ13459 2157 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 F8W810 466 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 GRM6O15303 877 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 B3GAT3O94766 335 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 FGFR1OPO95684 399 aaKnown RBP14.12□□□□□ -0.15
CNOT1-217ENST00000569263 CA8P35219 290 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 PTPROQ16827 1216 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 CCDC40Q4G0X9 1142 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 FUT10Q6P4F1 479 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 DCLRE1AQ6PJP8 1040 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 ZC3H3Q8IXZ2 948 aaKnown RBP14.12□□□□□ -0.15
CNOT1-217ENST00000569263 SPPL3Q8TCT6 385 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 POF1BQ8WVV4 589 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 CEP63Q96MT8 703 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 DUSP9Q99956 384 aaKnown RBP14.12□□□□□ -0.15
CNOT1-217ENST00000569263 MTMR12Q9C0I1 747 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 ENTPD7Q9NQZ7 604 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 TLR9Q9NR96 1032 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 INTS13Q9NVM9 706 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 STK39Q9UEW8 545 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 LZTS1Q9Y250 596 aa14.12□□□□□ -0.15
CNOT1-217ENST00000569263 SF3B1O75533 1304 aaKnown RBP eCLIP14.12□□□□□ -0.15
CNOT1-217ENST00000569263 LRRIQ3A6PVS8 624 aaPredicted RBP14.11□□□□□ -0.15
CNOT1-217ENST00000569263 TMEM189-UBE2V1I3L0A0 370 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 TRAPPC3O43617 180 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 CLSTN1O94985 981 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 ITGB3P05106 788 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 KRT19P08727 400 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 IGFBP4P22692 258 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 ERCC5P28715 1186 aaPredicted RBP14.11□□□□□ -0.15
CNOT1-217ENST00000569263 LRPAP1P30533 357 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 VAMP7P51809 220 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 AP3M2P53677 418 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 TYRO3Q06418 890 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 ELAVL2Q12926 359 aaKnown RBP14.11□□□□□ -0.15
CNOT1-217ENST00000569263 BFSP1Q12934 665 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 BMS1Q14692 1282 aaKnown RBP14.11□□□□□ -0.15
CNOT1-217ENST00000569263 DUOXA2Q1HG44 320 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 CT47A1Q5JQC4 288 aaPredicted RBP14.11□□□□□ -0.15
CNOT1-217ENST00000569263 DDX53Q86TM3 631 aaKnown RBP14.11□□□□□ -0.15
CNOT1-217ENST00000569263 TMEM130Q8N3G9 435 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 TMC2Q8TDI7 906 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 PARD3BQ8TEW8 1205 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 MYLIPQ8WY64 445 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 FAM84AQ96KN4 292 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 ZNF560Q96MR9 790 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 POP1Q99575 1024 aaKnown RBP14.11□□□□□ -0.15
CNOT1-217ENST00000569263 ARMCX3Q9UH62 379 aaPredicted RBP14.11□□□□□ -0.15
CNOT1-217ENST00000569263 ITGA11Q9UKX5 1188 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 PTPRJQ12913 1337 aa14.11□□□□□ -0.15
CNOT1-217ENST00000569263 SYCE3A1L190 88 aa14.1□□□□□ -0.15
CNOT1-217ENST00000569263 LPXNO60711 386 aa14.1□□□□□ -0.15
CNOT1-217ENST00000569263 PHACTR2O75167 634 aa14.1□□□□□ -0.15
CNOT1-217ENST00000569263 URODP06132 367 aa14.1□□□□□ -0.15
CNOT1-217ENST00000569263 CCDC192P0DO97 292 aa14.1□□□□□ -0.15
CNOT1-217ENST00000569263 POLR2BP30876 1174 aaKnown RBP14.1□□□□□ -0.15
CNOT1-217ENST00000569263 BIRC3Q13489 604 aa14.1□□□□□ -0.15
CNOT1-217ENST00000569263 DCAF17Q5H9S7 520 aaPredicted RBP14.1□□□□□ -0.15
CNOT1-217ENST00000569263 TCERG1LQ5VWI1 586 aa14.1□□□□□ -0.15
CNOT1-217ENST00000569263 C9orf57Q5W0N0 161 aa14.1□□□□□ -0.15
CNOT1-217ENST00000569263 TMC7Q7Z402 723 aa14.1□□□□□ -0.15
CNOT1-217ENST00000569263 FILIP1Q7Z7B0 1213 aa14.1□□□□□ -0.15
CNOT1-217ENST00000569263 VPS52Q8N1B4 723 aa14.1□□□□□ -0.15
CNOT1-217ENST00000569263 C1orf127Q8N9H9 656 aa14.1□□□□□ -0.15
CNOT1-217ENST00000569263 C3orf58Q8NDZ4 430 aa14.1□□□□□ -0.15
CNOT1-217ENST00000569263 OR5B17Q8NGF7 314 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms