RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 UBE4BO95155 1302 aa13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 UNC80Q8N2C7 3258 aa13.62□□□□□ -0.23
NSMCE1-214ENST00000569236 FSCN2O14926 492 aa13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 CBFA2T2O43439 604 aa13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 KCNE1P15382 129 aa13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 ADSSP30520 456 aa13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 ACOT2P49753 483 aa13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 GSDMDP57764 484 aa13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 PSMD2Q13200 908 aa13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 HSP90AA2PQ14568 343 aaPredicted RBP13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 RABGGTAQ92696 567 aa13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 ZMAT2Q96NC0 199 aaKnown RBP13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 PAAF1Q9BRP4 392 aa13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 RMND1Q9NWS8 449 aa13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 CACNG4Q9UBN1 327 aa13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 CPSF3Q9UKF6 684 aaKnown RBP13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 ADAM28Q9UKQ2 775 aa13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 NFE2L3Q9Y4A8 694 aa13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 PCDHGC5Q9Y5F6 944 aa13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 PDCD11Q14690 1871 aaKnown RBP13.61□□□□□ -0.23
NSMCE1-214ENST00000569236 TTC26A0AVF1 554 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 F8W810 466 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 MEFVO15553 781 aaPredicted RBP13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 GARTP22102 1010 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 CA8P35219 290 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 STK4Q13043 487 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 SMC1AQ14683 1233 aaKnown RBP13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 ENOX2Q16206 610 aaKnown RBP13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 ADGRD2Q7Z7M1 963 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 LRRC8AQ8IWT6 810 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 CACTINQ8WUQ7 758 aaKnown RBP13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 SCFD1Q8WVM8 642 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 UROC1Q96N76 676 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 MED15Q96RN5 788 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 VN1R3Q9BXE9 311 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 ZBP1Q9H171 429 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 PYCARDQ9ULZ3 195 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 SPTBN5Q9NRC6 3674 aaKnown RBP13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 NCK2O43639 380 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 TADA2AO75478 443 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 LDHAP00338 332 aaKnown RBP13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 SOD2P04179 222 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 CTSAP10619 480 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 HOXD13P35453 343 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 CLCNKBP51801 687 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 ARMCX5Q6P1M9 558 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 RBM23Q86U06 439 aaKnown RBP13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 CD302Q8IX05 232 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 NELFCDQ8IXH7 590 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 HLA-CQ95604 372 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 FAM212AQ96EL1 285 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 IGFLR1Q9H665 355 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 TLE6Q9H808 572 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 GOLGA2P5Q9HBQ8 144 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 PRDM6Q9NQX0 595 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 THEGQ9P2T0 379 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 COG5Q9UP83 839 aa13.6□□□□□ -0.23
NSMCE1-214ENST00000569236 HIDE1A8MVS5 230 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 LACTBL1A8MY62 500 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 PPP1R3GB7ZBB8 358 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 KIF4AO95239 1232 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 CXCL14O95715 111 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 SERPINC1P01008 464 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 CD44P16070 742 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 NRIP1P48552 1158 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 UBASH3AP57075 661 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 POU5F1Q01860 360 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 SOX4Q06945 474 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 SPAG1Q07617 926 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 HYAL1Q12794 435 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 LRMPQ12912 555 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 KCNB1Q14721 858 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 UPP1Q16831 310 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 BMT2Q1RMZ1 405 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 ZNF658Q5TYW1 1059 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 FUT10Q6P4F1 479 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 FILIP1Q7Z7B0 1213 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 MRPL43Q8N983 215 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 KIAA0895Q8NCT3 520 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 HASPINQ8TF76 798 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 C18orf25Q96B23 403 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 SAAL1Q96ER3 474 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 KIF12Q96FN5 646 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 DDX27Q96GQ7 796 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 TSPAN18Q96SJ8 248 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 CBWD1Q9BRT8 395 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 FAM213AQ9BRX8 229 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 PCIF1Q9H4Z3 704 aa13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 SF3B1O75533 1304 aaKnown RBP eCLIP13.59□□□□□ -0.23
NSMCE1-214ENST00000569236 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 C2orf71A6NGG8 1288 aa13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 PER2O15055 1255 aa13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 KIAA0391O15091 583 aaKnown RBP13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 XPOTO43592 962 aaKnown RBP13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 B3GAT3O94766 335 aa13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 RHOBTB3O94955 611 aa13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 ADRB2P07550 413 aa13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 SNRPFP62306 86 aaKnown RBP13.58□□□□□ -0.23
NSMCE1-214ENST00000569236 KNOP1Q1ED39 458 aaKnown RBP13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms