RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 MYL7Q01449 175 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 PPP3CAQ08209 521 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 KCNH2Q12809 1159 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 BIRC3Q13489 604 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 BTG3Q14201 252 aaPredicted RBP8.3□□□□□ -1.08
SCAPER-221ENST00000568549 NAB2Q15742 525 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 ZBTB6Q15916 424 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 VWA3BQ502W6 1294 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 TRAPPC11Q7Z392 1133 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 CMTR2Q8IYT2 770 aaKnown RBP8.3□□□□□ -1.08
SCAPER-221ENST00000568549 OR5B17Q8NGF7 314 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 ZNF516Q92618 1163 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 C18orf25Q96B23 403 aaPredicted RBP8.3□□□□□ -1.08
SCAPER-221ENST00000568549 FAM84AQ96KN4 292 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 FAM193BQ96PV7 902 aaPredicted RBP8.3□□□□□ -1.08
SCAPER-221ENST00000568549 VPS16Q9H269 839 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 RC3H2Q9HBD1 1191 aaKnown RBP8.3□□□□□ -1.08
SCAPER-221ENST00000568549 GOLGA2P5Q9HBQ8 144 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 TMEM8AQ9HCN3 771 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 TBC1D13Q9NVG8 400 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 DPP3Q9NY33 737 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 ITGA11Q9UKX5 1188 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 INSL6Q9Y581 213 aa8.3□□□□□ -1.08
SCAPER-221ENST00000568549 CASTOR2A6NHX0 329 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 ZC3H11AO75152 810 aaKnown RBP eCLIP8.29□□□□□ -1.08
SCAPER-221ENST00000568549 PHACTR2O75167 634 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 DDHD2O94830 711 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 C4BPAP04003 597 aaKnown RBP8.29□□□□□ -1.08
SCAPER-221ENST00000568549 ITGB3P05106 788 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 KRT19P08727 400 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 PIK3CAP42336 1068 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 FMO5P49326 533 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 GUCY2FP51841 1108 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 FANCCQ00597 558 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 SOX4Q06945 474 aaPredicted RBP8.29□□□□□ -1.08
SCAPER-221ENST00000568549 TUSC3Q13454 348 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 ZACNQ401N2 412 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 FILIP1LQ4L180 1135 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 CBWD6Q4V339 395 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 CBWD3Q5JTY5 395 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 MIIPQ5JXC2 388 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 CBWD5Q5RIA9 395 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 SPOUT1Q5T280 376 aaKnown RBP8.29□□□□□ -1.08
SCAPER-221ENST00000568549 TDRD10Q5VZ19 366 aaKnown RBP8.29□□□□□ -1.08
SCAPER-221ENST00000568549 KRT39Q6A163 491 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 SV2AQ7L0J3 742 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 APTXQ7Z2E3 356 aaKnown RBP8.29□□□□□ -1.08
SCAPER-221ENST00000568549 ZNF280BQ86YH2 543 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 TDHQ8IZJ6 230 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 C1orf127Q8N9H9 656 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 UROC1Q96N76 676 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 RAD9AQ99638 391 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 NDST4Q9H3R1 872 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 NRDE2Q9H7Z3 1164 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 HCSTQ9UBK5 93 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 R3HCC1Q9Y3T6 440 aaKnown RBP8.29□□□□□ -1.08
SCAPER-221ENST00000568549 PLXNA4Q9HCM2 1894 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 TSC2P49815 1807 aa8.29□□□□□ -1.08
SCAPER-221ENST00000568549 A0A1B0GTH6 734 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.28□□□□□ -1.08
SCAPER-221ENST00000568549 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.28□□□□□ -1.08
SCAPER-221ENST00000568549 LRRC10BA6NIK2 292 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 LGALS16A8MUM7 142 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 GRXCR1A8MXD5 290 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 PODXLO00592 558 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 PMM2O15305 246 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 P4HA2O15460 535 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 B4GALT3O60512 393 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 CLSTN1O94985 981 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 VNN1O95497 513 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 HLA-DRAP01903 254 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 LRPAP1P30533 357 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 POLR2BP30876 1174 aaKnown RBP8.28□□□□□ -1.08
SCAPER-221ENST00000568549 RPL9P32969 192 aaKnown RBP8.28□□□□□ -1.08
SCAPER-221ENST00000568549 OR1G1P47890 313 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 CLCNKBP51801 687 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 RABGGTBP53611 331 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 UBASH3AP57075 661 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 RBP5P82980 135 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 PLCB2Q00722 1185 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 DSC1Q08554 894 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 CETN1Q12798 172 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 TRPC3Q13507 836 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 NCOA4Q13772 614 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 UVSSAQ2YD98 709 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 FKBP15Q5T1M5 1219 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 C9orf57Q5W0N0 161 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 FAM109BQ6ICB4 259 aaPredicted RBP8.28□□□□□ -1.08
SCAPER-221ENST00000568549 C15orf39Q6ZRI6 1047 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 COLGALT2Q8IYK4 626 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 TMEM130Q8N3G9 435 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 FIBCD1Q8N539 461 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 FBXL13Q8NEE6 735 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 DDX27Q96GQ7 796 aaKnown RBP8.28□□□□□ -1.08
SCAPER-221ENST00000568549 TMEM175Q9BSA9 504 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 PRO3102Q9H379 93 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 CWH43Q9H720 699 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 RTN4Q9NQC3 1192 aaKnown RBP8.28□□□□□ -1.08
SCAPER-221ENST00000568549 CACNG4Q9UBN1 327 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 DNAJB4Q9UDY4 337 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms