RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 KIF20AO95235 890 aa18.67■□□□□ 0.58
COMMD4-220ENST00000567720 NR3C1P04150 777 aa18.67■□□□□ 0.58
COMMD4-220ENST00000567720 CYP3A5P20815 502 aa18.67■□□□□ 0.58
COMMD4-220ENST00000567720 LRPAP1P30533 357 aa18.67■□□□□ 0.58
COMMD4-220ENST00000567720 GTF2F1P35269 517 aaKnown RBP eCLIP18.67■□□□□ 0.584e-9■■■■■ 28.7
COMMD4-220ENST00000567720 PRCPP42785 496 aa18.67■□□□□ 0.58
COMMD4-220ENST00000567720 HYAL1Q12794 435 aa18.67■□□□□ 0.58
COMMD4-220ENST00000567720 SMC1AQ14683 1233 aaKnown RBP18.67■□□□□ 0.58
COMMD4-220ENST00000567720 SPATA1Q5VX52 437 aa18.67■□□□□ 0.58
COMMD4-220ENST00000567720 ISM2Q6H9L7 571 aa18.67■□□□□ 0.58
COMMD4-220ENST00000567720 TMC7Q7Z402 723 aa18.67■□□□□ 0.58
COMMD4-220ENST00000567720 TSPAN18Q96SJ8 248 aa18.67■□□□□ 0.58
COMMD4-220ENST00000567720 PDE11AQ9HCR9 933 aa18.67■□□□□ 0.58
COMMD4-220ENST00000567720 DMAC2Q9NW81 257 aa18.67■□□□□ 0.58
COMMD4-220ENST00000567720 TRAF3IP3Q9Y228 551 aa18.67■□□□□ 0.58
COMMD4-220ENST00000567720 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.66■□□□□ 0.58
COMMD4-220ENST00000567720 GOLGA6L22H0YM25 854 aa18.66■□□□□ 0.58
COMMD4-220ENST00000567720 BIN1O00499 593 aa18.66■□□□□ 0.58
COMMD4-220ENST00000567720 B3GAT3O94766 335 aa18.66■□□□□ 0.58
COMMD4-220ENST00000567720 MORC3Q14149 939 aa18.66■□□□□ 0.58
COMMD4-220ENST00000567720 PDE12Q6L8Q7 609 aaKnown RBP18.66■□□□□ 0.58
COMMD4-220ENST00000567720 SLC9A9Q8IVB4 645 aa18.66■□□□□ 0.58
COMMD4-220ENST00000567720 TMEM174Q8WUU8 243 aa18.66■□□□□ 0.58
COMMD4-220ENST00000567720 GZF1Q9H116 711 aaPredicted RBP18.66■□□□□ 0.58
COMMD4-220ENST00000567720 NGRNQ9NPE2 291 aaKnown RBP18.66■□□□□ 0.58
COMMD4-220ENST00000567720 PRDM6Q9NQX0 595 aa18.66■□□□□ 0.58
COMMD4-220ENST00000567720 STK39Q9UEW8 545 aa18.66■□□□□ 0.58
COMMD4-220ENST00000567720 C2orf71A6NGG8 1288 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 ZNF233A6NK53 670 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 I3L4J1 428 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 XPOTO43592 962 aaKnown RBP18.65■□□□□ 0.58
COMMD4-220ENST00000567720 TADA2AO75478 443 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 URODP06132 367 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 CD44P16070 742 aaKnown RBP18.65■□□□□ 0.58
COMMD4-220ENST00000567720 RPL9P32969 192 aaKnown RBP18.65■□□□□ 0.58
COMMD4-220ENST00000567720 BRCC3P46736 316 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 GLUD2P49448 558 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 CYP24A1Q07973 514 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 COL19A1Q14993 1142 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 NFIL3Q16649 462 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 RTP2Q5QGT7 225 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 LMBRD2Q68DH5 695 aaPredicted RBP18.65■□□□□ 0.58
COMMD4-220ENST00000567720 DCLRE1AQ6PJP8 1040 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 ADSSL1Q8N142 457 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 RDH13Q8NBN7 331 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 BEST2Q8NFU1 509 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 MICAL1Q8TDZ2 1067 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 DDX27Q96GQ7 796 aaKnown RBP18.65■□□□□ 0.58
COMMD4-220ENST00000567720 MTMR12Q9C0I1 747 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 NUP62CLQ9H1M0 184 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 KIAA1586Q9HCI6 787 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 CHST7Q9NS84 486 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.65■□□□□ 0.58
COMMD4-220ENST00000567720 IRAK3Q9Y616 596 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 C5orf42Q9H799 3197 aa18.65■□□□□ 0.58
COMMD4-220ENST00000567720 C2orf16Q68DN1 1984 aa18.64■□□□□ 0.58
COMMD4-220ENST00000567720 CALUO43852 315 aaPredicted RBP18.64■□□□□ 0.57
COMMD4-220ENST00000567720 EXOC3O60645 756 aa18.64■□□□□ 0.57
COMMD4-220ENST00000567720 NR2F2P24468 414 aa18.64■□□□□ 0.57
COMMD4-220ENST00000567720 CA8P35219 290 aa18.64■□□□□ 0.57
COMMD4-220ENST00000567720 NRIP1P48552 1158 aa18.64■□□□□ 0.57
COMMD4-220ENST00000567720 CASP4P49662 377 aa18.64■□□□□ 0.57
COMMD4-220ENST00000567720 DSG1Q02413 1049 aa18.64■□□□□ 0.57
COMMD4-220ENST00000567720 DUSP6Q16828 381 aa18.64■□□□□ 0.57
COMMD4-220ENST00000567720 RBM23Q86U06 439 aaKnown RBP18.64■□□□□ 0.57
COMMD4-220ENST00000567720 NT5DC4Q86YG4 428 aa18.64■□□□□ 0.57
COMMD4-220ENST00000567720 MRPL43Q8N983 215 aaKnown RBP18.64■□□□□ 0.57
COMMD4-220ENST00000567720 PLEKHO2Q8TD55 490 aa18.64■□□□□ 0.57
COMMD4-220ENST00000567720 KIAA1468Q9P260 1216 aa18.64■□□□□ 0.57
COMMD4-220ENST00000567720 ANO9A1A5B4 782 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 TRIM49BA6NDI0 452 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 C2CD2LO14523 706 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 PER2O15055 1255 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 LINC01565O15544 149 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 LILRB3O75022 631 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 GLP2RO95838 553 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 PMS1P54277 932 aaKnown RBP18.63■□□□□ 0.57
COMMD4-220ENST00000567720 RBM10P98175 930 aaKnown RBP18.63■□□□□ 0.57
COMMD4-220ENST00000567720 TFAMQ00059 246 aaKnown RBP18.63■□□□□ 0.57
COMMD4-220ENST00000567720 PSMD6Q15008 389 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 SKIV2LQ15477 1246 aaKnown RBP18.63■□□□□ 0.57
COMMD4-220ENST00000567720 USP41Q3LFD5 358 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 FAM171A1Q5VUB5 890 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 KIAA0319Q5VV43 1072 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 C9orf57Q5W0N0 161 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 CENPPQ6IPU0 288 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 C1orf127Q8N9H9 656 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 VN1R2Q8NFZ6 395 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 OR5B17Q8NGF7 314 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 PPP2R3CQ969Q6 453 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 GTPBP4Q9BZE4 634 aaKnown RBP18.63■□□□□ 0.57
COMMD4-220ENST00000567720 DENND4AQ7Z401 1863 aa18.63■□□□□ 0.57
COMMD4-220ENST00000567720 VCANP13611 3396 aa18.62■□□□□ 0.57
COMMD4-220ENST00000567720 TBX10O75333 385 aa18.62■□□□□ 0.57
COMMD4-220ENST00000567720 CXCL14O95715 111 aa18.62■□□□□ 0.57
COMMD4-220ENST00000567720 TKTP29401 623 aaKnown RBP18.62■□□□□ 0.57
COMMD4-220ENST00000567720 MCM4P33991 863 aa18.62■□□□□ 0.57
COMMD4-220ENST00000567720 AARSP49588 968 aaKnown RBP eCLIP18.62■□□□□ 0.57
COMMD4-220ENST00000567720 ELAVL2Q12926 359 aaKnown RBP18.62■□□□□ 0.57
COMMD4-220ENST00000567720 MYBPC2Q14324 1141 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms