RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 WEE2P0C1S8 567 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 CDH6P55285 790 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 CEP55Q53EZ4 464 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 RBBP8NLQ8NC74 664 aaPredicted RBP13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 CMTM5Q96DZ9 223 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 ZSWIM1Q9BR11 485 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 ZC3H7BQ9UGR2 993 aaKnown RBP13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 FNDC3AQ9Y2H6 1198 aaKnown RBP13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 LRCH1Q9Y2L9 728 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 IL10P22301 178 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 SMARCA1P28370 1054 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 FNTAP49354 379 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 ZNF667Q5HYK9 610 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 HAUS6Q7Z4H7 955 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 CATSPER3Q86XQ3 398 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 OPTNQ96CV9 577 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 FAM111AQ96PZ2 611 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 GDF3Q9NR23 364 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 QRICH2Q9H0J4 1663 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 TULP4Q9NRJ4 1543 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 AKAP10O43572 662 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 APRTP07741 180 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 NT5DC1Q5TFE4 455 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 SLFN12LQ6IEE8 588 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 POTEAQ6S8J7 498 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 RCOR2Q8IZ40 523 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 KAZALD1Q96I82 304 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 ADNPQ9H2P0 1102 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 PPCSQ9HAB8 311 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 XPO7Q9UIA9 1087 aaKnown RBP13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 SPDYE16A6NNV3 312 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 PFDN6O15212 129 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 DAB1O75553 588 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 SLC4A1P02730 911 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 RALAP11233 206 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 OSBPP22059 807 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 CHI3L2Q15782 390 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 SPDYE2Q495Y8 402 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 ZC2HC1CQ53FD0 456 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 THEMIS2Q5TEJ8 643 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 MFN1Q8IWA4 741 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 SCUBE1Q8IWY4 988 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 USP6NLQ92738 828 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 TATDN2Q93075 761 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 NCLNQ969V3 563 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 EPHB2P29323 1055 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 KCNQ4P56696 695 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 HEATR6Q6AI08 1181 aaKnown RBP13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 TRIM72Q6ZMU5 477 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 NEDD1Q8NHV4 660 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 LXNQ9BS40 222 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 RAB6BQ9NRW1 208 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 KBTBD4Q9NVX7 518 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 RSPH10B2B2RC85 870 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 CHEK2O96017 543 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 RSPH10BP0C881 870 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 SRGAP2CP0DJJ0 459 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 SESN2P58004 480 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 NTRK3Q16288 839 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 IYDQ6PHW0 289 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 ENOSF1Q7L5Y1 443 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 RMDN2Q96LZ7 410 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 PKD2L2Q9NZM6 624 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 PI4KBQ9UBF8 816 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 C2CD2Q9Y426 696 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 GJA3Q9Y6H8 435 aa13.05□□□□□ -0.32
CSPG4P13-202ENST00000567704 ADAMTS13Q76LX8 1427 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 DGKIO75912 1065 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 ABL1P00519 1130 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 PSMD7P51665 324 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 TROAPQ12815 778 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 EPC2Q52LR7 807 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 ZNF571Q7Z3V5 609 aaPredicted RBP13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 NDUFAF2Q8N183 169 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 C20orf96Q9NUD7 363 aaPredicted RBP13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 PPME1Q9Y570 386 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 CLRN2A0PK11 232 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 FAM196BA6NMK8 535 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 LDHAP00338 332 aaKnown RBP13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 BMP6P22004 513 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 TFDP1Q14186 410 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 FAM98CQ17RN3 349 aaKnown RBP13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 C12orf60Q5U649 245 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 FAM160B1Q5W0V3 765 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 STK32AQ8WU08 396 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 SH2D3AQ9BRG2 576 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 CLPTM1O96005 669 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 S100BP04271 92 aaPredicted RBP13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 SNRPAP09012 282 aaKnown RBP13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 MYL2P10916 166 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 ATP4AP20648 1035 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 GEMIN4P57678 1058 aaKnown RBP13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 KCNJ2P63252 427 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 SKA2Q8WVK7 121 aaPredicted RBP13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 PBXIP1Q96AQ6 731 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 CLMNQ96JQ2 1002 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 SIKE1Q9BRV8 207 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 LRRC4Q9HBW1 653 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 KIAA1586Q9HCI6 787 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 PPIP5K2O43314 1243 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms