RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ZC3H11AO75152 810 aaKnown RBP eCLIP12.43□□□□□ -0.42
KARS-207ENST00000566560 FGFR1OPO95684 399 aaKnown RBP12.43□□□□□ -0.42
KARS-207ENST00000566560 THP07101 528 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 DLATP10515 647 aaKnown RBP12.43□□□□□ -0.42
KARS-207ENST00000566560 KRT13P13646 458 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 KCNE1P15382 129 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 SMAD3P84022 425 aaKnown RBP12.43□□□□□ -0.42
KARS-207ENST00000566560 MYL5Q02045 173 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 TMEM132DQ14C87 1099 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 SURF1Q15526 300 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 PROX2Q3B8N5 592 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 CCDC40Q4G0X9 1142 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 SPOUT1Q5T280 376 aaKnown RBP12.43□□□□□ -0.42
KARS-207ENST00000566560 INTS8Q75QN2 995 aaKnown RBP12.43□□□□□ -0.42
KARS-207ENST00000566560 USP37Q86T82 979 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 EFCAB13Q8IY85 973 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 CCDC127Q96BQ5 260 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 MFSD14AQ96MC6 490 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 FAM193BQ96PV7 902 aaPredicted RBP12.43□□□□□ -0.42
KARS-207ENST00000566560 FNBP1Q96RU3 617 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 TSPAN18Q96SJ8 248 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 CGRRF1Q99675 332 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 SRRTQ9BXP5 876 aaKnown RBP12.43□□□□□ -0.42
KARS-207ENST00000566560 MIOSQ9NXC5 875 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 TUBGCP4Q9UGJ1 667 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 UBQLN1Q9UMX0 589 aaKnown RBP12.43□□□□□ -0.42
KARS-207ENST00000566560 YBX2Q9Y2T7 364 aaKnown RBP12.43□□□□□ -0.42
KARS-207ENST00000566560 C2CD2Q9Y426 696 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 NFE2L3Q9Y4A8 694 aa12.43□□□□□ -0.42
KARS-207ENST00000566560 PTPRJQ12913 1337 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 LINC01553A4QN01 128 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 CASTOR2A6NHX0 329 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 XPOTO43592 962 aaKnown RBP12.42□□□□□ -0.42
KARS-207ENST00000566560 B4GALT3O60512 393 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 GNA14O95837 355 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 TMEM191BP0C7N4 346 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 LAG3P18627 525 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 DNAJB2P25686 324 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 ZNF165P49910 485 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 TFAMQ00059 246 aaKnown RBP12.42□□□□□ -0.42
KARS-207ENST00000566560 DSC1Q08554 894 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 BFSP1Q12934 665 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 TUSC3Q13454 348 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 LRIT3Q3SXY7 679 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 DCAF17Q5H9S7 520 aaPredicted RBP12.42□□□□□ -0.42
KARS-207ENST00000566560 SPATA1Q5VX52 437 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 PPP2R2DQ66LE6 453 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 LMBRD2Q68DH5 695 aaPredicted RBP12.42□□□□□ -0.42
KARS-207ENST00000566560 LRSAM1Q6UWE0 723 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 NT5DC4Q86YG4 428 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 WDR49Q8IV35 697 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 FAM114A1Q8IWE2 563 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 AOPEPQ8N6M6 819 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 BEST2Q8NFU1 509 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 ENOX1Q8TC92 643 aaKnown RBP12.42□□□□□ -0.42
KARS-207ENST00000566560 PLEKHO2Q8TD55 490 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 C18orf25Q96B23 403 aaPredicted RBP12.42□□□□□ -0.42
KARS-207ENST00000566560 CNOT6LQ96LI5 555 aaKnown RBP12.42□□□□□ -0.42
KARS-207ENST00000566560 BPIFA3Q9BQP9 254 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 MTMR12Q9C0I1 747 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 NKX2-4Q9H2Z4 354 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 GOLGA2P5Q9HBQ8 144 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 ARMCX3Q9UH62 379 aaPredicted RBP12.42□□□□□ -0.42
KARS-207ENST00000566560 DERAQ9Y315 318 aa12.42□□□□□ -0.42
KARS-207ENST00000566560 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.42□□□□□ -0.42
KARS-207ENST00000566560 LRRIQ3A6PVS8 624 aaPredicted RBP12.41□□□□□ -0.42
KARS-207ENST00000566560 DDHD2O94830 711 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 ARHGEF15O94989 841 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 TNNC2P02585 160 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 TRIM49P0CI25 452 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 TRIM49CP0CI26 452 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 TNNI1P19237 187 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 VAMP7P51809 220 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 GUCY2FP51841 1108 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 SOX4Q06945 474 aaPredicted RBP12.41□□□□□ -0.42
KARS-207ENST00000566560 NAB2Q15742 525 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 TCERG1LQ5VWI1 586 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 FILIP1Q7Z7B0 1213 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 PACS2Q86VP3 889 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 ZNF280BQ86YH2 543 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 COLGALT2Q8IYK4 626 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 TIFAQ96CG3 184 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 ANKRD36BP1Q96IX9 119 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 FAM84AQ96KN4 292 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 TMEM175Q9BSA9 504 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 TSPY26PQ9H489 355 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 THAP9Q9H5L6 903 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 CWH43Q9H720 699 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 NRDE2Q9H7Z3 1164 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 METTL14Q9HCE5 456 aaKnown RBP12.41□□□□□ -0.42
KARS-207ENST00000566560 AAASQ9NRG9 546 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 MAGEC2Q9UBF1 373 aaPredicted RBP12.41□□□□□ -0.42
KARS-207ENST00000566560 CACNG4Q9UBN1 327 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 DNAJB4Q9UDY4 337 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 PRG3Q9Y2Y8 225 aaPredicted RBP12.41□□□□□ -0.42
KARS-207ENST00000566560 RWDD3Q9Y3V2 267 aa12.41□□□□□ -0.42
KARS-207ENST00000566560 PLXNA4Q9HCM2 1894 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 CAVIN2O95810 425 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 LINC00271P0C7V0 271 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 CYP3A5P20815 502 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms