RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 ARHGAP44Q17R89 818 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 SGSM1Q2NKQ1 1148 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 MAP3K21Q5TCX8 1036 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 ZNF572Q7Z3I7 529 aaPredicted RBP9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 PDCD7Q8N8D1 485 aaKnown RBP9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 EPS8L1Q8TE68 723 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 PXYLP1Q8TE99 480 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 NLRP7Q8WX94 980 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 ANKRD36BP1Q96IX9 119 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 RPGRIP1Q96KN7 1286 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 ADPGKQ9BRR6 497 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 IMPG2Q9BZV3 1241 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 RPF1Q9H9Y2 349 aaKnown RBP9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 RNF14Q9UBS8 474 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 SRRDQ9UH36 339 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 C2CD2Q9Y426 696 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 PCDHB2Q9Y5E7 798 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 PTPRJQ12913 1337 aa9.53□□□□□ -0.88
LSM3P5-201ENST00000566307 GPR25O00155 361 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 CES2O00748 559 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 ADAMTS4O75173 837 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 RTN2O75298 545 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 LRRN2O75325 713 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 TADA3O75528 432 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 MTA2O94776 668 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 ERLIN2O94905 339 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 TNNC2P02585 160 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 VTNP04004 478 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 MYL3P08590 195 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 STAG3L1P0CL83 205 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 RARBP10826 455 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 CYP11B1P15538 503 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 TCP1P17987 556 aaKnown RBP9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 ACO1P21399 889 aaKnown RBP9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 EIF4BP23588 611 aaKnown RBP9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 ATICP31939 592 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 PDE6CP51160 858 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 ZNF132P52740 706 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 CRYBB1P53674 252 aaPredicted RBP9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 YWHAEP62258 255 aaKnown RBP9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 NOP14P78316 857 aaKnown RBP9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 PRKCZQ05513 592 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 PTPN11Q06124 597 aaPredicted RBP9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 CUL2Q13617 745 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 NCOA4Q13772 614 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 TRIM72Q6ZMU5 477 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 FAM43BQ6ZT52 329 aaPredicted RBP9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 SLFN11Q7Z7L1 901 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 ZBTB33Q86T24 672 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 GLYCTKQ8IVS8 523 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 RHOT2Q8IXI1 618 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 SYCE1Q8N0S2 351 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 TTC39CQ8N584 583 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 KLHDC9Q8NEP7 349 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 OR5B17Q8NGF7 314 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 RFFLQ8WZ73 363 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 DDX1Q92499 740 aaKnown RBP9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 TATDN2Q93075 761 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 SALL4Q9UJQ4 1053 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 GABRQQ9UN88 632 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 SAR1BQ9Y6B6 198 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 CAPN6Q9Y6Q1 641 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 DUSP10Q9Y6W6 482 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 MROH7Q68CQ1 1323 aa9.52□□□□□ -0.89
LSM3P5-201ENST00000566307 MACROD2A1Z1Q3 448 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 PHACTR2O75167 634 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 CABYRO75952 493 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 HMGCRP04035 888 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 TMEM191BP0C7N4 346 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 PNMA6AP0CW24 399 aaPredicted RBP9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 CHRNB2P17787 502 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 HOXA11P31270 313 aaPredicted RBP9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 GALCP54803 685 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 FMO1Q01740 532 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 CKAP4Q07065 602 aaKnown RBP9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 CACNB2Q08289 660 aaPredicted RBP9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 ARHGEF6Q15052 776 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 CCSAPQ6IQ19 270 aaPredicted RBP9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 NOTUMQ6P988 496 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 SLC27A1Q6PCB7 646 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 RSRC2Q7L4I2 434 aaKnown RBP9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 NOP9Q86U38 636 aaKnown RBP9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 EFCAB13Q8IY85 973 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 THNSL1Q8IYQ7 743 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 C7orf31Q8N865 590 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 LRRC57Q8N9N7 239 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 MNS1Q8NEH6 495 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 CXorf38Q8TB03 319 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 U2AF1L4Q8WU68 220 aaKnown RBP9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 CTNNBL1Q8WYA6 563 aaPredicted RBP9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 ANKRD7Q92527 254 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 KAT5Q92993 513 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 ZBTB10Q96DT7 871 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 ACAP3Q96P50 834 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 CCDC94Q9BW85 323 aaPredicted RBP9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 ARHGAP39Q9C0H5 1083 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 NIF3L1Q9GZT8 377 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 XYLT2Q9H1B5 865 aa9.51□□□□□ -0.89
LSM3P5-201ENST00000566307 APOBEC3GQ9HC16 384 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms