RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 TBC1D13Q9NVG8 400 aa16■□□□□ 0.15
SPG7-213ENST00000566221 TAB2Q9NYJ8 693 aa16■□□□□ 0.15
SPG7-213ENST00000566221 PLAGL2Q9UPG8 496 aa16■□□□□ 0.15
SPG7-213ENST00000566221 CYP3A5P20815 502 aa15.99■□□□□ 0.15
SPG7-213ENST00000566221 MXI1P50539 228 aa15.99■□□□□ 0.15
SPG7-213ENST00000566221 AFF1P51825 1210 aaKnown RBP15.99■□□□□ 0.15
SPG7-213ENST00000566221 COPB1P53618 953 aaKnown RBP15.99■□□□□ 0.15
SPG7-213ENST00000566221 HTRA4P83105 476 aaPredicted RBP15.99■□□□□ 0.15
SPG7-213ENST00000566221 PPP3CAQ08209 521 aa15.99■□□□□ 0.15
SPG7-213ENST00000566221 KCNH2Q12809 1159 aa15.99■□□□□ 0.15
SPG7-213ENST00000566221 TUSC3Q13454 348 aa15.99■□□□□ 0.15
SPG7-213ENST00000566221 NAB2Q15742 525 aa15.99■□□□□ 0.15
SPG7-213ENST00000566221 ZBTB6Q15916 424 aa15.99■□□□□ 0.15
SPG7-213ENST00000566221 OR5B17Q8NGF7 314 aa15.99■□□□□ 0.15
SPG7-213ENST00000566221 ANP32BQ92688 251 aaKnown RBP15.99■□□□□ 0.15
SPG7-213ENST00000566221 ZBED2Q9BTP6 218 aa15.99■□□□□ 0.15
SPG7-213ENST00000566221 MMRN2Q9H8L6 949 aa15.99■□□□□ 0.15
SPG7-213ENST00000566221 TMEM8AQ9HCN3 771 aa15.99■□□□□ 0.15
SPG7-213ENST00000566221 MIOSQ9NXC5 875 aa15.99■□□□□ 0.15
SPG7-213ENST00000566221 TUBGCP4Q9UGJ1 667 aa15.99■□□□□ 0.15
SPG7-213ENST00000566221 ITGA11Q9UKX5 1188 aa15.99■□□□□ 0.15
SPG7-213ENST00000566221 LRRC10BA6NIK2 292 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 PES1O00541 588 aaKnown RBP15.98■□□□□ 0.15
SPG7-213ENST00000566221 SERPINC1P01008 464 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 GCLMP48507 274 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 FMO5P49326 533 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 MYL7Q01449 175 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 BIRC3Q13489 604 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 ZACNQ401N2 412 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 VWA3BQ502W6 1294 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 PAN2Q504Q3 1202 aaKnown RBP15.98■□□□□ 0.15
SPG7-213ENST00000566221 MIIPQ5JXC2 388 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 KRT39Q6A163 491 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 GPR153Q6NV75 609 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 APTXQ7Z2E3 356 aaKnown RBP15.98■□□□□ 0.15
SPG7-213ENST00000566221 ZNF516Q92618 1163 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 C18orf25Q96B23 403 aaPredicted RBP15.98■□□□□ 0.15
SPG7-213ENST00000566221 UROC1Q96N76 676 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 FAM193BQ96PV7 902 aaPredicted RBP15.98■□□□□ 0.15
SPG7-213ENST00000566221 NDST4Q9H3R1 872 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 DPP3Q9NY33 737 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 INSL6Q9Y581 213 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 TSC2P49815 1807 aa15.98■□□□□ 0.15
SPG7-213ENST00000566221 LGALS16A8MUM7 142 aa15.97■□□□□ 0.15
SPG7-213ENST00000566221 PMM2O15305 246 aa15.97■□□□□ 0.15
SPG7-213ENST00000566221 P4HA2O15460 535 aa15.97■□□□□ 0.15
SPG7-213ENST00000566221 TLL1O43897 1013 aa15.97■□□□□ 0.15
SPG7-213ENST00000566221 FANCCQ00597 558 aa15.97■□□□□ 0.15
SPG7-213ENST00000566221 SOX4Q06945 474 aaPredicted RBP15.97■□□□□ 0.15
SPG7-213ENST00000566221 DSC1Q08554 894 aa15.97■□□□□ 0.15
SPG7-213ENST00000566221 CETN1Q12798 172 aa15.97■□□□□ 0.15
SPG7-213ENST00000566221 BTG3Q14201 252 aaPredicted RBP15.97■□□□□ 0.15
SPG7-213ENST00000566221 FILIP1LQ4L180 1135 aa15.97■□□□□ 0.15
SPG7-213ENST00000566221 TDRD10Q5VZ19 366 aaKnown RBP15.97■□□□□ 0.15
SPG7-213ENST00000566221 C15orf39Q6ZRI6 1047 aa15.97■□□□□ 0.15
SPG7-213ENST00000566221 SV2AQ7L0J3 742 aa15.97■□□□□ 0.15
SPG7-213ENST00000566221 TRAPPC11Q7Z392 1133 aa15.97■□□□□ 0.15
SPG7-213ENST00000566221 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.97■□□□□ 0.15
SPG7-213ENST00000566221 C1orf127Q8N9H9 656 aa15.97■□□□□ 0.15
SPG7-213ENST00000566221 FAM84AQ96KN4 292 aa15.97■□□□□ 0.15
SPG7-213ENST00000566221 RAD9AQ99638 391 aa15.97■□□□□ 0.15
SPG7-213ENST00000566221 VPS16Q9H269 839 aa15.97■□□□□ 0.15
SPG7-213ENST00000566221 LAMA3Q16787 3333 aa15.96■□□□□ 0.15
SPG7-213ENST00000566221 LAMA2P24043 3122 aaKnown RBP15.96■□□□□ 0.15
SPG7-213ENST00000566221 GTPBP10A4D1E9 387 aaKnown RBP15.96■□□□□ 0.15
SPG7-213ENST00000566221 CARNS1A5YM72 827 aa15.96■□□□□ 0.15
SPG7-213ENST00000566221 PHACTR2O75167 634 aa15.96■□□□□ 0.15
SPG7-213ENST00000566221 C4BPAP04003 597 aaKnown RBP15.96■□□□□ 0.15
SPG7-213ENST00000566221 ITGB3P05106 788 aa15.96■□□□□ 0.15
SPG7-213ENST00000566221 LRPAP1P30533 357 aa15.96■□□□□ 0.15
SPG7-213ENST00000566221 PIK3CAP42336 1068 aa15.96■□□□□ 0.15
SPG7-213ENST00000566221 CBWD6Q4V339 395 aa15.96■□□□□ 0.15
SPG7-213ENST00000566221 CBWD3Q5JTY5 395 aa15.96■□□□□ 0.15
SPG7-213ENST00000566221 CBWD5Q5RIA9 395 aa15.96■□□□□ 0.15
SPG7-213ENST00000566221 FKBP15Q5T1M5 1219 aa15.96■□□□□ 0.15
SPG7-213ENST00000566221 TDHQ8IZJ6 230 aa15.96■□□□□ 0.15
SPG7-213ENST00000566221 FBXL13Q8NEE6 735 aa15.96■□□□□ 0.15
SPG7-213ENST00000566221 SP7Q8TDD2 431 aaPredicted RBP15.96■□□□□ 0.15
SPG7-213ENST00000566221 DDX27Q96GQ7 796 aaKnown RBP15.96■□□□□ 0.15
SPG7-213ENST00000566221 TMEM175Q9BSA9 504 aa15.96■□□□□ 0.15
SPG7-213ENST00000566221 GOLGA2P5Q9HBQ8 144 aa15.96■□□□□ 0.15
SPG7-213ENST00000566221 MTMR10Q9NXD2 777 aa15.96■□□□□ 0.15
SPG7-213ENST00000566221 R3HCC1Q9Y3T6 440 aaKnown RBP15.96■□□□□ 0.15
SPG7-213ENST00000566221 PLXNA4Q9HCM2 1894 aa15.95■□□□□ 0.14
SPG7-213ENST00000566221 A0A1B0GTH6 734 aa15.95■□□□□ 0.14
SPG7-213ENST00000566221 CASTOR2A6NHX0 329 aa15.95■□□□□ 0.14
SPG7-213ENST00000566221 CBFA2T2O43439 604 aa15.95■□□□□ 0.14
SPG7-213ENST00000566221 ZC3H11AO75152 810 aaKnown RBP eCLIP15.95■□□□□ 0.14
SPG7-213ENST00000566221 DDHD2O94830 711 aa15.95■□□□□ 0.14
SPG7-213ENST00000566221 TPM3P06753 285 aa15.95■□□□□ 0.14
SPG7-213ENST00000566221 RPL9P32969 192 aaKnown RBP15.95■□□□□ 0.14
SPG7-213ENST00000566221 GUCY2FP51841 1108 aa15.95■□□□□ 0.14
SPG7-213ENST00000566221 TRPC3Q13507 836 aa15.95■□□□□ 0.14
SPG7-213ENST00000566221 SARM1Q6SZW1 724 aa15.95■□□□□ 0.14
SPG7-213ENST00000566221 ZNF280BQ86YH2 543 aa15.95■□□□□ 0.14
SPG7-213ENST00000566221 COLGALT2Q8IYK4 626 aa15.95■□□□□ 0.14
SPG7-213ENST00000566221 ZNF560Q96MR9 790 aa15.95■□□□□ 0.14
SPG7-213ENST00000566221 IMPG2Q9BZV3 1241 aa15.95■□□□□ 0.14
SPG7-213ENST00000566221 NRDE2Q9H7Z3 1164 aa15.95■□□□□ 0.14
SPG7-213ENST00000566221 SIX4Q9UIU6 781 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms