RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 CXCL16Q9H2A7 254 aa18.47■□□□□ 0.55
CLK3-217ENST00000566126 POLR3BQ9NW08 1133 aaPredicted RBP18.47■□□□□ 0.55
CLK3-217ENST00000566126 GTSE1Q9NYZ3 720 aa18.47■□□□□ 0.55
CLK3-217ENST00000566126 ESYT2A0FGR8 921 aa18.46■□□□□ 0.55
CLK3-217ENST00000566126 PATE3B3GLJ2 98 aa18.46■□□□□ 0.55
CLK3-217ENST00000566126 PTGESO14684 152 aa18.46■□□□□ 0.55
CLK3-217ENST00000566126 RHOBTB1O94844 696 aa18.46■□□□□ 0.55
CLK3-217ENST00000566126 ABLIM3O94929 683 aa18.46■□□□□ 0.55
CLK3-217ENST00000566126 NPTXRO95502 500 aa18.46■□□□□ 0.55
CLK3-217ENST00000566126 PTENP60484 403 aa18.46■□□□□ 0.55
CLK3-217ENST00000566126 ROR1Q01973 937 aa18.46■□□□□ 0.55
CLK3-217ENST00000566126 SGMS1Q86VZ5 419 aa18.46■□□□□ 0.55
CLK3-217ENST00000566126 YAF2Q8IY57 180 aa18.46■□□□□ 0.55
CLK3-217ENST00000566126 ZNF461Q8TAF7 563 aa18.46■□□□□ 0.55
CLK3-217ENST00000566126 FAM200AQ8TCP9 573 aa18.46■□□□□ 0.55
CLK3-217ENST00000566126 DDX27Q96GQ7 796 aaKnown RBP18.46■□□□□ 0.55
CLK3-217ENST00000566126 RBM28Q9NW13 759 aaKnown RBP18.46■□□□□ 0.55
CLK3-217ENST00000566126 SLC8A2Q9UPR5 921 aa18.46■□□□□ 0.55
CLK3-217ENST00000566126 THADAQ6YHU6 1953 aa18.46■□□□□ 0.55
CLK3-217ENST00000566126 APC2O95996 2303 aa18.45■□□□□ 0.54
CLK3-217ENST00000566126 ARID2Q68CP9 1835 aa18.45■□□□□ 0.54
CLK3-217ENST00000566126 PRRG1O14668 218 aa18.45■□□□□ 0.54
CLK3-217ENST00000566126 KHNYNO15037 678 aaKnown RBP18.45■□□□□ 0.54
CLK3-217ENST00000566126 ASAP2O43150 1006 aa18.45■□□□□ 0.54
CLK3-217ENST00000566126 B4GALT5O43286 388 aa18.45■□□□□ 0.54
CLK3-217ENST00000566126 SEC24AO95486 1093 aa18.45■□□□□ 0.54
CLK3-217ENST00000566126 SEC24BO95487 1268 aa18.45■□□□□ 0.54
CLK3-217ENST00000566126 TKTP29401 623 aaKnown RBP18.45■□□□□ 0.54
CLK3-217ENST00000566126 PSMC5P62195 406 aa18.45■□□□□ 0.54
CLK3-217ENST00000566126 MBTD1Q05BQ5 628 aa18.45■□□□□ 0.54
CLK3-217ENST00000566126 SCAPQ12770 1279 aa18.45■□□□□ 0.54
CLK3-217ENST00000566126 CYP4A22Q5TCH4 519 aa18.45■□□□□ 0.54
CLK3-217ENST00000566126 CHD1LQ86WJ1 897 aa18.45■□□□□ 0.54
CLK3-217ENST00000566126 CHCHD4Q8N4Q1 142 aa18.45■□□□□ 0.54
CLK3-217ENST00000566126 LRRC3BQ96PB8 259 aa18.45■□□□□ 0.54
CLK3-217ENST00000566126 INO80B-WBP1J3KQ70 363 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 ELF1P32519 619 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 IRX4P78413 519 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 NCBP1Q09161 790 aaKnown RBP18.44■□□□□ 0.54
CLK3-217ENST00000566126 TEAD2Q15562 447 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 PFKFB3Q16875 520 aaPredicted RBP18.44■□□□□ 0.54
CLK3-217ENST00000566126 SLC8B1Q6J4K2 584 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 SLC27A1Q6PCB7 646 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 APOA5Q6Q788 366 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 CD300LGQ6UXG3 332 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 IFNLR1Q8IU57 520 aaPredicted RBP18.44■□□□□ 0.54
CLK3-217ENST00000566126 SMC5Q8IY18 1101 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 TCEAL8Q8IYN2 117 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 CAMKK1Q8N5S9 505 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 HNRNPLLQ8WVV9 542 aaKnown RBP18.44■□□□□ 0.54
CLK3-217ENST00000566126 E2F7Q96AV8 911 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 ZFYVE19Q96K21 471 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 CEP170P1Q96L14 293 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 MKNK1Q9BUB5 465 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 INSL5Q9Y5Q6 135 aa18.44■□□□□ 0.54
CLK3-217ENST00000566126 MEFVO15553 781 aaPredicted RBP18.43■□□□□ 0.54
CLK3-217ENST00000566126 MYL4P12829 197 aa18.43■□□□□ 0.54
CLK3-217ENST00000566126 ATF2P15336 505 aa18.43■□□□□ 0.54
CLK3-217ENST00000566126 RFC5P40937 340 aa18.43■□□□□ 0.54
CLK3-217ENST00000566126 EPHA5P54756 1037 aa18.43■□□□□ 0.54
CLK3-217ENST00000566126 SIM1P81133 766 aaPredicted RBP18.43■□□□□ 0.54
CLK3-217ENST00000566126 GPIHBP1Q8IV16 184 aa18.43■□□□□ 0.54
CLK3-217ENST00000566126 HHIPQ96QV1 700 aa18.43■□□□□ 0.54
CLK3-217ENST00000566126 SLC32A1Q9H598 525 aa18.43■□□□□ 0.54
CLK3-217ENST00000566126 CYP4F11Q9HBI6 524 aa18.43■□□□□ 0.54
CLK3-217ENST00000566126 C6orf50Q9HD87 102 aa18.43■□□□□ 0.54
CLK3-217ENST00000566126 CEP72Q9P209 647 aa18.43■□□□□ 0.54
CLK3-217ENST00000566126 WRAP73Q9P2S5 460 aaPredicted RBP18.43■□□□□ 0.54
CLK3-217ENST00000566126 RBM8AQ9Y5S9 174 aaKnown RBP18.43■□□□□ 0.54
CLK3-217ENST00000566126 THP07101 528 aa18.42■□□□□ 0.54
CLK3-217ENST00000566126 EMC2Q15006 297 aa18.42■□□□□ 0.54
CLK3-217ENST00000566126 RTN1Q16799 776 aa18.42■□□□□ 0.54
CLK3-217ENST00000566126 ANKS3Q6ZW76 656 aa18.42■□□□□ 0.54
CLK3-217ENST00000566126 PIP4P1Q86T03 277 aa18.42■□□□□ 0.54
CLK3-217ENST00000566126 EXOC8Q8IYI6 725 aa18.42■□□□□ 0.54
CLK3-217ENST00000566126 SHKBP1Q8TBC3 707 aa18.42■□□□□ 0.54
CLK3-217ENST00000566126 TCP11Q8WWU5 503 aa18.42■□□□□ 0.54
CLK3-217ENST00000566126 LRIG1Q96JA1 1093 aa18.42■□□□□ 0.54
CLK3-217ENST00000566126 PLXNB3Q9ULL4 1909 aa18.42■□□□□ 0.54
CLK3-217ENST00000566126 NUP210Q8TEM1 1887 aaPredicted RBP18.41■□□□□ 0.54
CLK3-217ENST00000566126 CFAP46Q8IYW2 2715 aa18.41■□□□□ 0.54
CLK3-217ENST00000566126 A0A1B0GUA9 196 aa18.41■□□□□ 0.54
CLK3-217ENST00000566126 TMEM189-UBE2V1I3L0A0 370 aa18.41■□□□□ 0.54
CLK3-217ENST00000566126 EML1O00423 815 aa18.41■□□□□ 0.54
CLK3-217ENST00000566126 ATG13O75143 517 aa18.41■□□□□ 0.54
CLK3-217ENST00000566126 PRB1P04280 392 aa18.41■□□□□ 0.54
CLK3-217ENST00000566126 TNK2Q07912 1038 aa18.41■□□□□ 0.54
CLK3-217ENST00000566126 KARSQ15046 597 aaKnown RBP18.41■□□□□ 0.54
CLK3-217ENST00000566126 PMS2CLQ68D20 193 aa18.41■□□□□ 0.54
CLK3-217ENST00000566126 FSTL4Q6MZW2 842 aa18.41■□□□□ 0.54
CLK3-217ENST00000566126 SYNE3Q6ZMZ3 975 aa18.41■□□□□ 0.54
CLK3-217ENST00000566126 TMEM209Q96SK2 561 aa18.41■□□□□ 0.54
CLK3-217ENST00000566126 GPR88Q9GZN0 384 aa18.41■□□□□ 0.54
CLK3-217ENST00000566126 SLITRK6Q9H5Y7 841 aa18.41■□□□□ 0.54
CLK3-217ENST00000566126 PPME1Q9Y570 386 aa18.41■□□□□ 0.54
CLK3-217ENST00000566126 TRIP11Q15643 1979 aa18.41■□□□□ 0.54
CLK3-217ENST00000566126 H0Y626 953 aa18.4■□□□□ 0.54
CLK3-217ENST00000566126 I3L4J1 428 aa18.4■□□□□ 0.54
CLK3-217ENST00000566126 TRIM16O95361 564 aa18.4■□□□□ 0.54
CLK3-217ENST00000566126 PRKCBP05771 671 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms