RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ASB7Q9H672 318 aa18.23■□□□□ 0.51
USB1-211ENST00000565662 USP20Q9Y2K6 914 aa18.23■□□□□ 0.51
USB1-211ENST00000565662 VWA8A3KMH1 1905 aa18.22■□□□□ 0.51
USB1-211ENST00000565662 TTC26A0AVF1 554 aa18.22■□□□□ 0.51
USB1-211ENST00000565662 F8W810 466 aa18.22■□□□□ 0.51
USB1-211ENST00000565662 KIAA0391O15091 583 aaKnown RBP18.22■□□□□ 0.51
USB1-211ENST00000565662 LDHAP00338 332 aaKnown RBP18.22■□□□□ 0.51
USB1-211ENST00000565662 LRPAP1P30533 357 aa18.22■□□□□ 0.51
USB1-211ENST00000565662 CACNB1Q02641 598 aaPredicted RBP18.22■□□□□ 0.51
USB1-211ENST00000565662 PPM1LQ5SGD2 360 aa18.22■□□□□ 0.51
USB1-211ENST00000565662 ZNF280DQ6N043 979 aa18.22■□□□□ 0.51
USB1-211ENST00000565662 CCDC65Q8IXS2 484 aa18.22■□□□□ 0.51
USB1-211ENST00000565662 C12orf76Q8N812 135 aaPredicted RBP18.22■□□□□ 0.51
USB1-211ENST00000565662 BEST2Q8NFU1 509 aa18.22■□□□□ 0.51
USB1-211ENST00000565662 SUSD3Q96L08 255 aa18.22■□□□□ 0.51
USB1-211ENST00000565662 C5orf42Q9H799 3197 aa18.22■□□□□ 0.51
USB1-211ENST00000565662 A0A0B4J269 797 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 NPHP3-ACAD11A0A0J9YXS1 232 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 FAM86C2PA6NEL3 165 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 TMEM221A6NGB7 291 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 M0R296 226 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 CUTAO60888 179 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 ADRB2P07550 413 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 ZSCAN22P10073 491 aaPredicted RBP18.21■□□□□ 0.51
USB1-211ENST00000565662 CEBPZQ03701 1054 aaKnown RBP18.21■□□□□ 0.51
USB1-211ENST00000565662 SLC10A6Q3KNW5 377 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 TPGS2Q68CL5 300 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 SLC8B1Q6J4K2 584 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 PALB2Q86YC2 1186 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 CLSTN3Q9BQT9 956 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 IRF2BPLQ9H1B7 796 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 TMEM206Q9H813 350 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 MRPL44Q9H9J2 332 aaKnown RBP18.21■□□□□ 0.51
USB1-211ENST00000565662 C2CD2Q9Y426 696 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 STYXL1Q9Y6J8 313 aa18.21■□□□□ 0.51
USB1-211ENST00000565662 C8AP07357 584 aa18.2■□□□□ 0.5
USB1-211ENST00000565662 CXCL8P10145 99 aa18.2■□□□□ 0.5
USB1-211ENST00000565662 ELF1P32519 619 aa18.2■□□□□ 0.5
USB1-211ENST00000565662 MCM4P33991 863 aa18.2■□□□□ 0.5
USB1-211ENST00000565662 PRSS55Q6UWB4 352 aaPredicted RBP18.2■□□□□ 0.5
USB1-211ENST00000565662 ZNF720Q7Z2F6 126 aa18.2■□□□□ 0.5
USB1-211ENST00000565662 IQUBQ8NA54 791 aa18.2■□□□□ 0.5
USB1-211ENST00000565662 KIF12Q96FN5 646 aa18.2■□□□□ 0.5
USB1-211ENST00000565662 ZBTB45Q96K62 511 aaPredicted RBP18.2■□□□□ 0.5
USB1-211ENST00000565662 ACCSQ96QU6 501 aa18.2■□□□□ 0.5
USB1-211ENST00000565662 FIZ1Q96SL8 496 aa18.2■□□□□ 0.5
USB1-211ENST00000565662 EPS15L1Q9UBC2 864 aa18.2■□□□□ 0.5
USB1-211ENST00000565662 ATP6V1DQ9Y5K8 247 aa18.2■□□□□ 0.5
USB1-211ENST00000565662 FRMD3A2A2Y4 597 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 IL18RAPO95256 599 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 F13A1P00488 732 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 L1TD1Q5T7N2 865 aaKnown RBP18.19■□□□□ 0.5
USB1-211ENST00000565662 ADALQ6DHV7 355 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 SFR1Q86XK3 245 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 FBXL6Q8N531 539 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 ZNF461Q8TAF7 563 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 PBXIP1Q96AQ6 731 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 FAM122AQ96E09 287 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 B3GALT6Q96L58 329 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 ZMAT2Q96NC0 199 aaKnown RBP18.19■□□□□ 0.5
USB1-211ENST00000565662 CLIC6Q96NY7 704 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 GOLGA2P5Q9HBQ8 144 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 FOXD4L1Q9NU39 408 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 FAM13BQ9NYF5 915 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 CPSF3Q9UKF6 684 aaKnown RBP18.19■□□□□ 0.5
USB1-211ENST00000565662 AGO2Q9UKV8 859 aaKnown RBP18.19■□□□□ 0.5
USB1-211ENST00000565662 PCDHB8Q9UN66 801 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 CDY1Q9Y6F8 540 aa18.19■□□□□ 0.5
USB1-211ENST00000565662 PPP1R37O75864 691 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 GARTP22102 1010 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 TKTP29401 623 aaKnown RBP18.18■□□□□ 0.5
USB1-211ENST00000565662 GBP2P32456 591 aaPredicted RBP18.18■□□□□ 0.5
USB1-211ENST00000565662 OR1D2P34982 312 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 PLA2G5P39877 138 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 SOX4Q06945 474 aaPredicted RBP18.18■□□□□ 0.5
USB1-211ENST00000565662 TDGQ13569 410 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 SPECC1Q5M775 1068 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 VARS2Q5ST30 1063 aaKnown RBP18.18■□□□□ 0.5
USB1-211ENST00000565662 HFE2Q6ZVN8 426 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 DYMQ7RTS9 669 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 USP37Q86T82 979 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 GLYCTKQ8IVS8 523 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 ELMOD1Q8N336 334 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 RABGGTAQ92696 567 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 ZNF707Q96C28 371 aaPredicted RBP18.18■□□□□ 0.5
USB1-211ENST00000565662 CACNG4Q9UBN1 327 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 DSEQ9UL01 958 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 KCNH3Q9ULD8 1083 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 GTF3C3Q9Y5Q9 886 aa18.18■□□□□ 0.5
USB1-211ENST00000565662 TECTAO75443 2155 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 M0QZQ0 153 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 FAM189A1O60320 539 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 RFPL2O75678 378 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 GCNT3O95395 438 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 LRG1P02750 347 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 ODC1P11926 461 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 IDEP14735 1019 aa18.17■□□□□ 0.5
USB1-211ENST00000565662 RPL17P18621 184 aaKnown RBP18.17■□□□□ 0.5
USB1-211ENST00000565662 SP100P23497 879 aaPredicted RBP18.17■□□□□ 0.5
USB1-211ENST00000565662 YWHAHQ04917 246 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms