RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 ACOT2P49753 483 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 CLDN10P78369 228 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 MYL7Q01449 175 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 KCNMA1Q12791 1236 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 SNX17Q15036 470 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 FBXO46Q6PJ61 603 aaPredicted RBP10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 CRELD2Q6UXH1 353 aaPredicted RBP10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 SLC43A3Q8NBI5 491 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 ALS2CR12Q96Q35 445 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 FNBP1Q96RU3 617 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 OSMRQ99650 979 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 LACRTQ9GZZ8 138 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 RNF208Q9H0X6 261 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 PDZD7Q9H5P4 517 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 CDHR5Q9HBB8 845 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 STARD7Q9NQZ5 370 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 SNX12Q9UMY4 172 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 NOD1Q9Y239 953 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 JRKLQ9Y4A0 524 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 TRPV2Q9Y5S1 764 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 MACROD2A1Z1Q3 448 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 A6NNZ2 444 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 OPA1O60313 960 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 CSDE1O75534 798 aaKnown RBP10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 IL18RAPO95256 599 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 CLTAP09496 248 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 HSPA8P11142 646 aaKnown RBP10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 HARSP12081 509 aaKnown RBP10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 PRLRP16471 622 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 TCP1P17987 556 aaKnown RBP10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 PON1P27169 355 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 KLK7P49862 253 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 AP3M2P53677 418 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 DLG4P78352 724 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 C2orf54Q08AI8 447 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 DCAF4L1Q3SXM0 396 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 TUBB8Q3ZCM7 444 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 C1orf220Q5T0J3 134 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 EEF1DP3Q658K8 133 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 NOTUMQ6P988 496 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 BRSK2Q8IWQ3 736 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 CCDC155Q8N6L0 562 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 CCDC127Q96BQ5 260 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 CCDC42Q96M95 316 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 LSM14BQ9BX40 385 aaKnown RBP10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 NUCKS1Q9H1E3 243 aaKnown RBP10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 CDT1Q9H211 546 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 TMEM8AQ9HCN3 771 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 FAM207AQ9NSI2 230 aaPredicted RBP10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 GCNT4Q9P109 453 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 CEP72Q9P209 647 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 FBXL5Q9UKA1 691 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 CPSF3Q9UKF6 684 aaKnown RBP10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 OGDHLQ9ULD0 1010 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 HYOU1Q9Y4L1 999 aa10.13□□□□□ -0.79
CNEP1R1-206ENST00000565556 RCCD1A6NED2 376 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 ARVCFO00192 962 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 PDE2AO00408 941 aaPredicted RBP10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 FAM189A1O60320 539 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 CLSTN1O94985 981 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 MYBL2P10244 700 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 DLATP10515 647 aaKnown RBP10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 TNFRSF8P28908 595 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 HNRNPH3P31942 346 aaKnown RBP10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 GCLMP48507 274 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 CTCFP49711 727 aaPredicted RBP10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 MXI1P50539 228 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 EPHB4P54760 987 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 PPP3CAQ08209 521 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 CBWD6Q4V339 395 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 CBWD3Q5JTY5 395 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 CBWD5Q5RIA9 395 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 KRT39Q6A163 491 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 SLC27A1Q6PCB7 646 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 EMBQ6PCB8 327 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 CACNA2D4Q7Z3S7 1137 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 TADA2BQ86TJ2 420 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 GSPT2Q8IYD1 628 aaKnown RBP10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 THNSL1Q8IYQ7 743 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 PLEKHO2Q8TD55 490 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 ZBTB9Q96C00 473 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 CPB2Q96IY4 423 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 DEFB118Q96PH6 123 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 IFIH1Q9BYX4 1025 aaKnown RBP10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 RPF1Q9H9Y2 349 aaKnown RBP10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 AGPAT5Q9NUQ2 364 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 TFR2Q9UP52 801 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 CDY2AQ9Y6F7 541 aa10.12□□□□□ -0.79
CNEP1R1-206ENST00000565556 A0A087WUV0 522 aaPredicted RBP10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 AGPSO00116 658 aa10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 ZNF185O15231 689 aa10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 ZMYND10O75800 440 aa10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 TNNI1P19237 187 aa10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 SLC9A1P19634 815 aa10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 RFX1P22670 979 aa10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 HOXA11P31270 313 aaPredicted RBP10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 MTFR1Q15390 333 aa10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 FAM26DQ5JW98 314 aa10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 ZBTB41Q5SVQ8 909 aa10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 KLHDC7AQ5VTJ3 777 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms