RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 ADRB2P07550 413 aa28.15■■■□□ 2.1
NME3-208ENST00000565379 ALADP13716 330 aa28.15■■■□□ 2.1
NME3-208ENST00000565379 NR2F2P24468 414 aa28.15■■■□□ 2.1
NME3-208ENST00000565379 ACOT2P49753 483 aa28.15■■■□□ 2.1
NME3-208ENST00000565379 CYP2J2P51589 502 aa28.15■■■□□ 2.1
NME3-208ENST00000565379 AFF1P51825 1210 aaKnown RBP28.15■■■□□ 2.1
NME3-208ENST00000565379 TYRO3Q06418 890 aa28.15■■■□□ 2.1
NME3-208ENST00000565379 XKR4Q5GH76 650 aa28.15■■■□□ 2.1
NME3-208ENST00000565379 NOMO2Q5JPE7 1267 aa28.15■■■□□ 2.1
NME3-208ENST00000565379 TMEM173Q86WV6 379 aaPredicted RBP28.15■■■□□ 2.1
NME3-208ENST00000565379 SAAL1Q96ER3 474 aa28.15■■■□□ 2.1
NME3-208ENST00000565379 ASB7Q9H672 318 aa28.15■■■□□ 2.1
NME3-208ENST00000565379 PRKAG3Q9UGI9 489 aa28.15■■■□□ 2.1
NME3-208ENST00000565379 BARX2Q9UMQ3 279 aaPredicted RBP28.15■■■□□ 2.1
NME3-208ENST00000565379 CARNS1A5YM72 827 aa28.14■■■□□ 2.1
NME3-208ENST00000565379 FAM86C2PA6NEL3 165 aa28.14■■■□□ 2.1
NME3-208ENST00000565379 FGFR1OPO95684 399 aaKnown RBP28.14■■■□□ 2.1
NME3-208ENST00000565379 UBE3AQ05086 875 aa28.14■■■□□ 2.1
NME3-208ENST00000565379 PPP2R3AQ06190 1150 aa28.14■■■□□ 2.1
NME3-208ENST00000565379 SURF1Q15526 300 aa28.14■■■□□ 2.1
NME3-208ENST00000565379 ZSCAN23Q3MJ62 389 aa28.14■■■□□ 2.1
NME3-208ENST00000565379 CRELD2Q6UXH1 353 aaPredicted RBP28.14■■■□□ 2.1
NME3-208ENST00000565379 ALKAL1Q6UXT8 129 aa28.14■■■□□ 2.1
NME3-208ENST00000565379 BRSK2Q8IWQ3 736 aa28.14■■■□□ 2.1
NME3-208ENST00000565379 ZC3H3Q8IXZ2 948 aaKnown RBP28.14■■■□□ 2.1
NME3-208ENST00000565379 SLC39A11Q8N1S5 342 aa28.14■■■□□ 2.1
NME3-208ENST00000565379 EFHBQ8N7U6 833 aa28.14■■■□□ 2.1
NME3-208ENST00000565379 SNX27Q96L92 541 aa28.14■■■□□ 2.1
NME3-208ENST00000565379 CEP63Q96MT8 703 aa28.14■■■□□ 2.1
NME3-208ENST00000565379 GAD1Q99259 594 aa28.14■■■□□ 2.1
NME3-208ENST00000565379 TLE6Q9H808 572 aa28.14■■■□□ 2.1
NME3-208ENST00000565379 CNTN3Q9P232 1028 aa28.14■■■□□ 2.1
NME3-208ENST00000565379 HIDE1A8MVS5 230 aa28.13■■■□□ 2.09
NME3-208ENST00000565379 MBTPS2O43462 519 aa28.13■■■□□ 2.09
NME3-208ENST00000565379 MLH1P40692 756 aa28.13■■■□□ 2.09
NME3-208ENST00000565379 TNFSF9P41273 254 aa28.13■■■□□ 2.09
NME3-208ENST00000565379 NDUFV1P49821 464 aa28.13■■■□□ 2.09
NME3-208ENST00000565379 ENOX2Q16206 610 aaKnown RBP28.13■■■□□ 2.09
NME3-208ENST00000565379 SNRNP35Q16560 246 aaKnown RBP28.13■■■□□ 2.09
NME3-208ENST00000565379 SLC10A6Q3KNW5 377 aa28.13■■■□□ 2.09
NME3-208ENST00000565379 SEZ6Q53EL9 994 aa28.13■■■□□ 2.09
NME3-208ENST00000565379 TTI2Q6NXR4 508 aa28.13■■■□□ 2.09
NME3-208ENST00000565379 BCL7CQ8WUZ0 217 aaPredicted RBP28.13■■■□□ 2.09
NME3-208ENST00000565379 MSLNLQ96KJ4 702 aa28.13■■■□□ 2.09
NME3-208ENST00000565379 MKNK1Q9BUB5 465 aa28.13■■■□□ 2.09
NME3-208ENST00000565379 NAT10Q9H0A0 1025 aaKnown RBP28.13■■■□□ 2.09
NME3-208ENST00000565379 RBAKQ9NYW8 714 aaPredicted RBP28.13■■■□□ 2.09
NME3-208ENST00000565379 TTC26A0AVF1 554 aa28.12■■■□□ 2.09
NME3-208ENST00000565379 SYCE3A1L190 88 aa28.12■■■□□ 2.09
NME3-208ENST00000565379 CXCL8P10145 99 aa28.12■■■□□ 2.09
NME3-208ENST00000565379 KCNE1P15382 129 aa28.12■■■□□ 2.09
NME3-208ENST00000565379 PMS1P54277 932 aaKnown RBP28.12■■■□□ 2.09
NME3-208ENST00000565379 BCAR1P56945 870 aa28.12■■■□□ 2.09
NME3-208ENST00000565379 PLCB3Q01970 1234 aa28.12■■■□□ 2.09
NME3-208ENST00000565379 GRIK3Q13003 919 aa28.12■■■□□ 2.09
NME3-208ENST00000565379 ZBTB41Q5SVQ8 909 aa28.12■■■□□ 2.09
NME3-208ENST00000565379 USP37Q86T82 979 aa28.12■■■□□ 2.09
NME3-208ENST00000565379 NT5DC4Q86YG4 428 aa28.12■■■□□ 2.09
NME3-208ENST00000565379 SLC38A7Q9NVC3 462 aa28.12■■■□□ 2.09
NME3-208ENST00000565379 TBC1D13Q9NVG8 400 aa28.12■■■□□ 2.09
NME3-208ENST00000565379 SPG21Q9NZD8 308 aa28.12■■■□□ 2.09
NME3-208ENST00000565379 DERAQ9Y315 318 aa28.12■■■□□ 2.09
NME3-208ENST00000565379 GOLGA8IPA6NC78 632 aa28.11■■■□□ 2.09
NME3-208ENST00000565379 TRIM49BA6NDI0 452 aa28.11■■■□□ 2.09
NME3-208ENST00000565379 GOLGA8JA6NMD2 632 aa28.11■■■□□ 2.09
NME3-208ENST00000565379 PRR33A8MZF0 331 aa28.11■■■□□ 2.09
NME3-208ENST00000565379 PSMC2P35998 433 aaKnown RBP28.11■■■□□ 2.09
NME3-208ENST00000565379 ZP2Q05996 745 aa28.11■■■□□ 2.09
NME3-208ENST00000565379 ENPEPQ07075 957 aa28.11■■■□□ 2.09
NME3-208ENST00000565379 CEP135Q66GS9 1140 aa28.11■■■□□ 2.09
NME3-208ENST00000565379 NOC3LQ8WTT2 800 aaKnown RBP28.11■■■□□ 2.09
NME3-208ENST00000565379 TCF25Q9BQ70 676 aa28.11■■■□□ 2.09
NME3-208ENST00000565379 KLK14Q9P0G3 267 aa28.11■■■□□ 2.09
NME3-208ENST00000565379 CD207Q9UJ71 328 aa28.11■■■□□ 2.09
NME3-208ENST00000565379 SLC16A3O15427 465 aaKnown RBP28.1■■■□□ 2.09
NME3-208ENST00000565379 XPOTO43592 962 aaKnown RBP28.1■■■□□ 2.09
NME3-208ENST00000565379 ZC3H11AO75152 810 aaKnown RBP eCLIP28.1■■■□□ 2.095e-7■□□□□ 8.5
NME3-208ENST00000565379 CAVIN2O95810 425 aa28.1■■■□□ 2.09
NME3-208ENST00000565379 THP07101 528 aa28.1■■■□□ 2.09
NME3-208ENST00000565379 DUSP6Q16828 381 aa28.1■■■□□ 2.09
NME3-208ENST00000565379 CBWD2Q8IUF1 395 aa28.1■■■□□ 2.09
NME3-208ENST00000565379 CSGALNACT2Q8N6G5 542 aa28.1■■■□□ 2.09
NME3-208ENST00000565379 GSTCDQ8NEC7 633 aa28.1■■■□□ 2.09
NME3-208ENST00000565379 PPP2R3CQ969Q6 453 aa28.1■■■□□ 2.09
NME3-208ENST00000565379 MFSD14AQ96MC6 490 aa28.1■■■□□ 2.09
NME3-208ENST00000565379 ZFP42Q96MM3 310 aa28.1■■■□□ 2.09
NME3-208ENST00000565379 FAM193BQ96PV7 902 aaPredicted RBP28.1■■■□□ 2.09
NME3-208ENST00000565379 DUSP9Q99956 384 aaKnown RBP28.1■■■□□ 2.09
NME3-208ENST00000565379 NRDE2Q9H7Z3 1164 aa28.1■■■□□ 2.09
NME3-208ENST00000565379 ENTPD7Q9NQZ7 604 aa28.1■■■□□ 2.09
NME3-208ENST00000565379 DNAJB4Q9UDY4 337 aa28.1■■■□□ 2.09
NME3-208ENST00000565379 LZTS1Q9Y250 596 aa28.1■■■□□ 2.09
NME3-208ENST00000565379 SMIM28A0A1B0GU29 152 aa28.09■■■□□ 2.09
NME3-208ENST00000565379 C19orf67A6NJJ6 358 aa28.09■■■□□ 2.09
NME3-208ENST00000565379 LACTBL1A8MY62 500 aa28.09■■■□□ 2.09
NME3-208ENST00000565379 GNA14O95837 355 aa28.09■■■□□ 2.09
NME3-208ENST00000565379 EPB41P11171 864 aaKnown RBP28.09■■■□□ 2.09
NME3-208ENST00000565379 STX17P56962 302 aa28.09■■■□□ 2.09
NME3-208ENST00000565379 RNASELQ05823 741 aaKnown RBP28.09■■■□□ 2.09
NME3-208ENST00000565379 SMAD4Q13485 552 aaKnown RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms