RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 HOXA9P31269 272 aa10.95□□□□□ -0.66
CMTM3-209ENST00000565003 TNFSF9P41273 254 aa10.95□□□□□ -0.66
CMTM3-209ENST00000565003 MATR3P43243 847 aaKnown RBP eCLIP10.95□□□□□ -0.66
CMTM3-209ENST00000565003 LIG4P49917 911 aa10.95□□□□□ -0.66
CMTM3-209ENST00000565003 NTHL1P78549 312 aa10.95□□□□□ -0.66
CMTM3-209ENST00000565003 CEBPZQ03701 1054 aaKnown RBP10.95□□□□□ -0.66
CMTM3-209ENST00000565003 SPAG1Q07617 926 aa10.95□□□□□ -0.66
CMTM3-209ENST00000565003 TDGQ13569 410 aa10.95□□□□□ -0.66
CMTM3-209ENST00000565003 PPM1LQ5SGD2 360 aa10.95□□□□□ -0.66
CMTM3-209ENST00000565003 LIN9Q5TKA1 542 aa10.95□□□□□ -0.66
CMTM3-209ENST00000565003 SLC39A4Q6P5W5 647 aa10.95□□□□□ -0.66
CMTM3-209ENST00000565003 ANKS3Q6ZW76 656 aa10.95□□□□□ -0.66
CMTM3-209ENST00000565003 GRASPQ7Z6J2 395 aaPredicted RBP10.95□□□□□ -0.66
CMTM3-209ENST00000565003 SLC7A14Q8TBB6 771 aa10.95□□□□□ -0.66
CMTM3-209ENST00000565003 INTS4Q96HW7 963 aaKnown RBP10.95□□□□□ -0.66
CMTM3-209ENST00000565003 CLIC6Q96NY7 704 aa10.95□□□□□ -0.66
CMTM3-209ENST00000565003 ZHX3Q9H4I2 956 aa10.95□□□□□ -0.66
CMTM3-209ENST00000565003 IGSF9Q9P2J2 1179 aa10.95□□□□□ -0.66
CMTM3-209ENST00000565003 BACE2Q9Y5Z0 518 aa10.95□□□□□ -0.66
CMTM3-209ENST00000565003 PIEZO1Q92508 2521 aa10.94□□□□□ -0.66
CMTM3-209ENST00000565003 TTC26A0AVF1 554 aa10.94□□□□□ -0.66
CMTM3-209ENST00000565003 SYN3O14994 580 aa10.94□□□□□ -0.66
CMTM3-209ENST00000565003 TBCAO75347 108 aaKnown RBP10.94□□□□□ -0.66
CMTM3-209ENST00000565003 CLTAP09496 248 aa10.94□□□□□ -0.66
CMTM3-209ENST00000565003 HNRNPA1P09651 372 aaKnown RBP eCLIP10.94□□□□□ -0.66
CMTM3-209ENST00000565003 FSHRP23945 695 aa10.94□□□□□ -0.66
CMTM3-209ENST00000565003 NMT1P30419 496 aaKnown RBP10.94□□□□□ -0.66
CMTM3-209ENST00000565003 RPL9P32969 192 aaKnown RBP10.94□□□□□ -0.66
CMTM3-209ENST00000565003 ROR1Q01973 937 aa10.94□□□□□ -0.66
CMTM3-209ENST00000565003 TCF15Q12870 199 aa10.94□□□□□ -0.66
CMTM3-209ENST00000565003 ENOX2Q16206 610 aaKnown RBP10.94□□□□□ -0.66
CMTM3-209ENST00000565003 ZC2HC1CQ53FD0 456 aaPredicted RBP10.94□□□□□ -0.66
CMTM3-209ENST00000565003 VARS2Q5ST30 1063 aaKnown RBP10.94□□□□□ -0.66
CMTM3-209ENST00000565003 AXDND1Q5T1B0 1012 aaPredicted RBP10.94□□□□□ -0.66
CMTM3-209ENST00000565003 SLC8B1Q6J4K2 584 aa10.94□□□□□ -0.66
CMTM3-209ENST00000565003 TMEM105Q8N8V8 129 aa10.94□□□□□ -0.66
CMTM3-209ENST00000565003 ST13P5Q8NFI4 369 aaPredicted RBP10.94□□□□□ -0.66
CMTM3-209ENST00000565003 SUSD3Q96L08 255 aa10.94□□□□□ -0.66
CMTM3-209ENST00000565003 PLEKHA5Q9HAU0 1116 aa10.94□□□□□ -0.66
CMTM3-209ENST00000565003 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.94□□□□□ -0.661e-6■■■■□ 20.6
CMTM3-209ENST00000565003 DUSP12Q9UNI6 340 aa10.94□□□□□ -0.66
CMTM3-209ENST00000565003 NUB1Q9Y5A7 615 aa10.94□□□□□ -0.66
CMTM3-209ENST00000565003 SRPRBQ9Y5M8 271 aaKnown RBP10.94□□□□□ -0.66
CMTM3-209ENST00000565003 WDFY4Q6ZS81 3184 aa10.94□□□□□ -0.66
CMTM3-209ENST00000565003 CACNA1HO95180 2353 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 A0A0B4J269 797 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 WDR27A2RRH5 827 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 TISP43B9A030 160 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 TBC1D4O60343 1298 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 LAMP2P13473 410 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 SCP2P22307 547 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 LRPAP1P30533 357 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 MCM4P33991 863 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 DDIT3P35638 169 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 GTF2BQ00403 316 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 MRPL58Q14197 206 aaKnown RBP10.93□□□□□ -0.66
CMTM3-209ENST00000565003 ZBTB6Q15916 424 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 CWF19L1Q69YN2 538 aaKnown RBP10.93□□□□□ -0.66
CMTM3-209ENST00000565003 DYMQ7RTS9 669 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 SFR1Q86XK3 245 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 MAP4K3Q8IVH8 894 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 SLC44A3Q8N4M1 653 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 KIF12Q96FN5 646 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 USP28Q96RU2 1077 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 PHOX2BQ99453 314 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 IKZF4Q9H2S9 585 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 HCFC1R1Q9NWW0 138 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 STK17AQ9UEE5 414 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 POLIQ9UNA4 740 aa10.93□□□□□ -0.66
CMTM3-209ENST00000565003 NOTCH4Q99466 2003 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 A0A087X0B3 334 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 MYMKA6NI61 221 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 LACTBL1A8MY62 500 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 ANKRD63C9JTQ0 380 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 ANHXE9PGG2 379 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 PPEF2O14830 753 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 OGTO15294 1046 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 STX6O43752 255 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 XYLBO75191 536 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 ABLIM3O94929 683 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 ADRB2P07550 413 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 POU2F2P09086 479 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 NPR3P17342 541 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 GUCY2FP51841 1108 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 PTPN5P54829 565 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 ARPP19P56211 112 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 PPP2R3AQ06190 1150 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 HTR4Q13639 388 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 KYAT1Q16773 422 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 UVSSAQ2YD98 709 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 ALYREFQ86V81 257 aaKnown RBP10.92□□□□□ -0.66
CMTM3-209ENST00000565003 KRI1Q8N9T8 703 aaKnown RBP10.92□□□□□ -0.66
CMTM3-209ENST00000565003 FLCNQ8NFG4 579 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 ZNF461Q8TAF7 563 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 ITFG1Q8TB96 612 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 DDX12PQ92771 950 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 FGF13Q92913 245 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 PRRX2Q99811 253 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 MSTO1Q9BUK6 570 aa10.92□□□□□ -0.66
CMTM3-209ENST00000565003 MFSD1Q9H3U5 465 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms