RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 PCDH11YQ9BZA8 1340 aa5.18□□□□□ -1.58
CAPN3-212ENST00000564503 RGPD3A6NKT7 1758 aaPredicted RBP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 RGPD4Q7Z3J3 1758 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 GOLGA6L7A0A1B0GV03 622 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 GRID2IPA4D2P6 1211 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 TRIM49BA6NDI0 452 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 PES1O00541 588 aaKnown RBP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 TNFRSF10CO14798 259 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 CLGNO14967 610 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 PEX10O60683 326 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 FKTNO75072 461 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 USP2O75604 605 aaPredicted RBP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 DDAH1O94760 285 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 RHOBTB3O94955 611 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 PCP11498 1178 aaKnown RBP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 TRIM21P19474 475 aaKnown RBP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 NR1D1P20393 614 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 GPTP24298 496 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 CCNE1P24864 410 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 HNRNPH3P31942 346 aaKnown RBP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 LSP1P33241 339 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 ZNF76P36508 570 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 KIR2DL1P43626 348 aaPredicted RBP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 KIR2DL2P43627 348 aaPredicted RBP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 PHKA1P46020 1223 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 MTIF2P46199 727 aaKnown RBP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 DLG4P78352 724 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 PPARAQ07869 468 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 ACTN3Q08043 901 aaPredicted RBP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 PDCLQ13371 301 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 NEDD9Q14511 834 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 PUM3Q15397 648 aaKnown RBP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 SLC14A2Q15849 920 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 PTGISQ16647 500 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 CCDC96Q2M329 555 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 BBS9Q3SYG4 887 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 PREPLQ4J6C6 727 aaPredicted RBP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 EARS2Q5JPH6 523 aaKnown RBP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 FKBP15Q5T1M5 1219 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 NAA35Q5VZE5 725 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 SPTY2D1Q68D10 685 aaPredicted RBP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 PPP4R3AQ6IN85 833 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 LRIG3Q6UXM1 1119 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 CATIPQ7Z7H3 387 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 NLRP14Q86W24 1093 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 AMIGO3Q86WK7 504 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 SPATA5Q8NB90 893 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 ARL8AQ96BM9 186 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 HHIPL1Q96JK4 782 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 CCDC42Q96M95 316 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 CCDC43Q96MW1 224 aaKnown RBP5.17□□□□□ -1.58
CAPN3-212ENST00000564503 SLC6A18Q96N87 628 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 ORAI2Q96SN7 254 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 TUBGCP2Q9BSJ2 902 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 KRTAP4-7Q9BYR0 210 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 EDEM3Q9BZQ6 932 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 CCSER1Q9C0I3 900 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 UBA5Q9GZZ9 404 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 CUEDC2Q9H467 287 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 GDF3Q9NR23 364 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 CHST7Q9NS84 486 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 AGPAT5Q9NUQ2 364 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 LRWD1Q9UFC0 647 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 TFR2Q9UP52 801 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 GDAQ9Y2T3 454 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 PCDHA13Q9Y5I0 950 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 ABCB11O95342 1321 aa5.17□□□□□ -1.58
CAPN3-212ENST00000564503 MACROD2A1Z1Q3 448 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 RASSF10A6NK89 507 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 B4DLN1 442 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 MYO1FO00160 1098 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 LAD1O00515 517 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 KLRC4O43908 158 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 PDE8AO60658 829 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 PRDM1O75626 825 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 MOCS3O95396 460 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 FGFR1OPO95684 399 aaKnown RBP5.16□□□□□ -1.58
CAPN3-212ENST00000564503 FGFR2P21802 821 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 CALML3P27482 149 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 MDH1P40925 334 aaKnown RBP5.16□□□□□ -1.58
CAPN3-212ENST00000564503 MAGEA1P43355 309 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 KIF11P52732 1056 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 CTSWP56202 376 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 LINC00310P59036 64 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 IFFO1Q0D2I5 559 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 EZH2Q15910 746 aaKnown RBP5.16□□□□□ -1.58
CAPN3-212ENST00000564503 SNCBQ16143 134 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 IL17AQ16552 155 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 CFAP221Q4G0U5 840 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 COBLL1Q53SF7 1204 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 IFIT1BQ5T764 474 aaKnown RBP5.16□□□□□ -1.58
CAPN3-212ENST00000564503 WLSQ5T9L3 541 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 RNF187Q5TA31 235 aaPredicted RBP5.16□□□□□ -1.58
CAPN3-212ENST00000564503 CIAPIN1Q6FI81 312 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 TTI2Q6NXR4 508 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 CEP128Q6ZU80 1094 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 CCDC121Q6ZUS5 278 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 TMTC3Q6ZXV5 915 aa5.16□□□□□ -1.58
CAPN3-212ENST00000564503 TAX1BP1Q86VP1 789 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms