RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 CASP4P49662 377 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 CDK17Q00537 523 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 CAPSQ13938 189 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 MAPK6Q16659 721 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 CTC1Q2NKJ3 1217 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 CDCA2Q69YH5 1023 aaPredicted RBP10.55□□□□□ -0.72
UBFD1-203ENST00000564106 PTCRAQ6ISU1 281 aaPredicted RBP10.55□□□□□ -0.72
UBFD1-203ENST00000564106 NPAS4Q8IUM7 802 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 TMEM139Q8IV31 216 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 KSR1Q8IVT5 923 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 CCDC170Q8IYT3 715 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 ZNF710Q8N1W2 664 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 GPD1LQ8N335 351 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 TXLNBQ8N3L3 684 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 METTL13Q8N6R0 699 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 KLHL23Q8NBE8 558 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 VN1R2Q8NFZ6 395 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 SPPL3Q8TCT6 385 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 PRPF31Q8WWY3 499 aaKnown RBP10.55□□□□□ -0.72
UBFD1-203ENST00000564106 SYN2Q92777 582 aaPredicted RBP10.55□□□□□ -0.72
UBFD1-203ENST00000564106 MAP7D2Q96T17 732 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 NSUN3Q9H649 340 aaKnown RBP10.55□□□□□ -0.72
UBFD1-203ENST00000564106 CWH43Q9H720 699 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 RRAGDQ9NQL2 400 aaPredicted RBP10.55□□□□□ -0.72
UBFD1-203ENST00000564106 FAM207AQ9NSI2 230 aaPredicted RBP10.55□□□□□ -0.72
UBFD1-203ENST00000564106 PLAGL2Q9UPG8 496 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 STYXL1Q9Y6J8 313 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 SQORQ9Y6N5 450 aa10.55□□□□□ -0.72
UBFD1-203ENST00000564106 MEIS3P2A8K0S8 358 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 B4GALT3O60512 393 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 RPS6KA5O75582 802 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 HNRNPH3P31942 346 aaKnown RBP10.54□□□□□ -0.72
UBFD1-203ENST00000564106 GTF2H1P32780 548 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 CYLC1P35663 651 aaPredicted RBP10.54□□□□□ -0.72
UBFD1-203ENST00000564106 FMO5P49326 533 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 GPC3P51654 580 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 VAMP7P51809 220 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 NLRP11P59045 1033 aaKnown RBP10.54□□□□□ -0.72
UBFD1-203ENST00000564106 MCCD1P59942 119 aaPredicted RBP10.54□□□□□ -0.72
UBFD1-203ENST00000564106 MYL7Q01449 175 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 LAMTOR4Q0VGL1 99 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 SNRNP35Q16560 246 aaKnown RBP10.54□□□□□ -0.72
UBFD1-203ENST00000564106 MEA1Q16626 185 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 PTPN21Q16825 1174 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 TIGD5Q53EQ6 642 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 DNTTIP2Q5QJE6 756 aaKnown RBP10.54□□□□□ -0.72
UBFD1-203ENST00000564106 EFCAB12Q6NXP0 572 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 CMTR2Q8IYT2 770 aaKnown RBP10.54□□□□□ -0.72
UBFD1-203ENST00000564106 CCAR2Q8N163 923 aaKnown RBP10.54□□□□□ -0.72
UBFD1-203ENST00000564106 TMC2Q8TDI7 906 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 ASAP3Q8TDY4 903 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 PABPC5Q96DU9 382 aaKnown RBP10.54□□□□□ -0.72
UBFD1-203ENST00000564106 FBXL18Q96ME1 805 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 SAMD11Q96NU1 681 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 CBWD1Q9BRT8 395 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 KIFC3Q9BVG8 833 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 MRPL4Q9BYD3 311 aaKnown RBP10.54□□□□□ -0.72
UBFD1-203ENST00000564106 RGS18Q9NS28 235 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 CLDND1Q9NY35 253 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 GCNT4Q9P109 453 aa10.54□□□□□ -0.72
UBFD1-203ENST00000564106 SUCLA2Q9P2R7 463 aaPredicted RBP10.54□□□□□ -0.72
UBFD1-203ENST00000564106 ZNF233A6NK53 670 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 TBKBP1A7MCY6 615 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 EXTL3O43909 919 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 RPLP2P05387 115 aaKnown RBP10.53□□□□□ -0.72
UBFD1-203ENST00000564106 CCDC172P0C7W6 258 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 CRYBB1P53674 252 aaPredicted RBP10.53□□□□□ -0.72
UBFD1-203ENST00000564106 ERVFC1P60507 584 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 FAM189BP81408 668 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 PCBP1Q15365 356 aaKnown RBP eCLIP10.53□□□□□ -0.72
UBFD1-203ENST00000564106 AAK1Q2M2I8 961 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 CLLU1OSQ5K130 101 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 EP400NLQ6ZTU2 488 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 ZNF410Q86VK4 478 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 IFNLR1Q8IU57 520 aaPredicted RBP10.53□□□□□ -0.72
UBFD1-203ENST00000564106 RHPN2Q8IUC4 686 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 NME8Q8N427 588 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 RNF149Q8NC42 400 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 FAM81BQ96LP2 452 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 PRIMPOLQ96LW4 560 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 CASD1Q96PB1 797 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 LSM14BQ9BX40 385 aaKnown RBP10.53□□□□□ -0.72
UBFD1-203ENST00000564106 IGFLR1Q9H665 355 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 LUC7LQ9NQ29 371 aaKnown RBP10.53□□□□□ -0.72
UBFD1-203ENST00000564106 PRMT7Q9NVM4 692 aaPredicted RBP10.53□□□□□ -0.72
UBFD1-203ENST00000564106 CLEC1BQ9P126 229 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 CDH22Q9UJ99 828 aa10.53□□□□□ -0.72
UBFD1-203ENST00000564106 BZW2Q9Y6E2 419 aaKnown RBP10.53□□□□□ -0.72
UBFD1-203ENST00000564106 ANKRD63C9JTQ0 380 aa10.52□□□□□ -0.73
UBFD1-203ENST00000564106 M0QZ92 97 aa10.52□□□□□ -0.73
UBFD1-203ENST00000564106 CLDN3O15551 220 aa10.52□□□□□ -0.73
UBFD1-203ENST00000564106 TOM1L1O75674 476 aa10.52□□□□□ -0.73
UBFD1-203ENST00000564106 PRKCBP05771 671 aa10.52□□□□□ -0.73
UBFD1-203ENST00000564106 RB1P06400 928 aa10.52□□□□□ -0.73
UBFD1-203ENST00000564106 ANXA13P27216 316 aa10.52□□□□□ -0.73
UBFD1-203ENST00000564106 MATR3P43243 847 aaKnown RBP eCLIP10.52□□□□□ -0.73
UBFD1-203ENST00000564106 MXI1P50539 228 aa10.52□□□□□ -0.73
UBFD1-203ENST00000564106 KRT83P78385 493 aa10.52□□□□□ -0.73
UBFD1-203ENST00000564106 ZP2Q05996 745 aa10.52□□□□□ -0.73
UBFD1-203ENST00000564106 KCNMA1Q12791 1236 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms