RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 TRAF3IP3Q9Y228 551 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 GMEB1Q9Y692 573 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 ZMYM2Q9UBW7 1377 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 GCNT3O95395 438 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 PABPC4LP0CB38 370 aaKnown RBP13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 RFC4P35249 363 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 STAT3P40763 770 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 GPC5P78333 572 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 PABPC4Q13310 644 aaKnown RBP eCLIP13.1□□□□□ -0.315e-11■□□□□ 8.8
SCAMP2-204ENST00000563829 MDH1BQ5I0G3 518 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 WNT8AQ9H1J5 351 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 A0A0J9YVX5 310 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 H3BRJ5 948 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 TRIM49P0CI25 452 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 TRIM49CP0CI26 452 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 CCDC166P0CW27 439 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 FUT4P22083 530 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 ADRA1DP25100 572 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 PRDX5P30044 214 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 RASSF3Q86WH2 238 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 RNF168Q8IYW5 571 aaPredicted RBP13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 WDR66Q8TBY9 1149 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 PPP2R3CQ969Q6 453 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 RBM15Q96T37 977 aaKnown RBP eCLIP13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 AGPAT1Q99943 283 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 RMI1Q9H9A7 625 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 CYLDQ9NQC7 956 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 TMOD3Q9NYL9 352 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 COL1A1P02452 1464 aaPredicted RBP13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 TXNDC9O14530 226 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 MAGEB3O15480 346 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 PIAS1O75925 651 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 STK10O94804 968 aaKnown RBP13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 GAS8O95995 478 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 RPL13P26373 211 aaKnown RBP13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 ARFIP2P53365 341 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 CAVIN4Q5BKX8 364 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 CCDC174Q6PII3 467 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 MAP7D3Q8IWC1 876 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 SYT11Q9BT88 431 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 GPR88Q9GZN0 384 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 IL1RAPL1Q9NZN1 696 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 ATAD5Q96QE3 1844 aa13.09□□□□□ -0.31
SCAMP2-204ENST00000563829 SFI1A8K8P3 1242 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 B2RBV5 119 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 RSPH10B2B2RC85 870 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 RSPH10BP0C881 870 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 MAGEA4P43358 317 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 GALK1P51570 392 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 ADCY7P51828 1080 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 HPCAP84074 193 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 NR1H3Q13133 447 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 CBX3Q13185 183 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 CBWD6Q4V339 395 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 CBWD3Q5JTY5 395 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 CBWD5Q5RIA9 395 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 RGS9BPQ6ZS82 235 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 RAPH1Q70E73 1250 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 FBXO27Q8NI29 283 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 TRIM55Q9BYV6 548 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 SAYSD1Q9NPB0 183 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 FRMPD2Q68DX3 1309 aaPredicted RBP13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 GOLGA8RI6L899 631 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 PLS3P13797 630 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 KRT4P19013 534 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 SH3BGRP55822 239 aaPredicted RBP13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 PSMC6P62333 389 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 MED21Q13503 144 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 SUSD4Q5VX71 490 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 DUS1LQ6P1R4 473 aaKnown RBP13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 RIPOR1Q6ZS17 1223 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 LRRC6Q86X45 466 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 FAM186BQ8IYM0 893 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 REEP2Q9BRK0 252 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 LZTS2Q9BRK4 669 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 HEMGNQ9BXL5 484 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 VPS37BQ9H9H4 285 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 EURLQ9NYK6 297 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 PPM1HQ9ULR3 514 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 ZBTB1Q9Y2K1 713 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 ASTN1O14525 1302 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 A8MXQ7 604 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 PDXKO00764 312 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 PRPF4O43172 522 aaKnown RBP eCLIP13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 GCAP28676 217 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 FMO5P49326 533 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 AP2B1P63010 937 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 ORC2Q13416 577 aaPredicted RBP13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 SPDYAQ5MJ70 313 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 IZUMO3Q5VZ72 239 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 ARHGAP24Q8N264 748 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 RDH13Q8NBN7 331 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 CEP70Q8NHQ1 597 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 SLC5A5Q92911 643 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 MXD3Q9BW11 206 aa13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 SMG5Q9UPR3 1016 aaKnown RBP13.08□□□□□ -0.32
SCAMP2-204ENST00000563829 KDM3AQ9Y4C1 1321 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 ZNF862O60290 1169 aa13.07□□□□□ -0.32
SCAMP2-204ENST00000563829 ADARP55265 1226 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms