RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ACAD10Q6JQN1 1059 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 ANKMY2Q8IV38 441 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 FAM71AQ8IYT1 594 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 VTI1AQ96AJ9 217 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 FNBP1Q96RU3 617 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 TESPA1A2RU30 521 aaPredicted RBP12.56□□□□□ -0.4
ABCA3-203ENST00000563623 FAM47DPA6NHR8 397 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 GOLGA8RI6L899 631 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 RGL2O15211 777 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 UBE4BO95155 1302 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 P4HBP07237 508 aaKnown RBP12.56□□□□□ -0.4
ABCA3-203ENST00000563623 CETPP11597 493 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 ZNF268Q14587 947 aaPredicted RBP12.56□□□□□ -0.4
ABCA3-203ENST00000563623 LIN9Q5TKA1 542 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 MFSD5Q6N075 450 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 LDHDQ86WU2 507 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 ECHDC2Q86YB7 292 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 CCDC89Q8N998 374 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 FAM213AQ9BRX8 229 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 DCLK3Q9C098 648 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 MYLK2Q9H1R3 596 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 TRABDQ9H4I3 376 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 LRRC19Q9H756 370 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 RAB20Q9NX57 234 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 NOCTQ9UK39 431 aaKnown RBP12.56□□□□□ -0.4
ABCA3-203ENST00000563623 EXOC7Q9UPT5 735 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 O00370 1275 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 CYP3A4P08684 503 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 ZSCAN5DPP0CG00 497 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 ERFP50548 548 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 CRELD2Q6UXH1 353 aaPredicted RBP12.55□□□□□ -0.4
ABCA3-203ENST00000563623 GMCL1Q96IK5 515 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 AGBL1Q96MI9 1066 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 KLF6Q99612 283 aaPredicted RBP12.55□□□□□ -0.4
ABCA3-203ENST00000563623 TMEM109Q9BVC6 243 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 KMT5AQ9NQR1 393 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 KCNH7Q9NS40 1196 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 USP21Q9UK80 565 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 MAPK13O15264 365 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 FOXN2P32314 431 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 DYNLT1P63172 113 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 SPARCL1Q14515 664 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 ANKRD20A2Q5SQ80 823 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 ANKRD20A1Q5TYW2 823 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 ANKRD20A3Q5VUR7 823 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 BZW1Q7L1Q6 419 aaKnown RBP12.55□□□□□ -0.4
ABCA3-203ENST00000563623 MAGEB18Q96M61 343 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 NUDCD1Q96RS6 583 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 HERPUD2Q9BSE4 406 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 OSBPL8Q9BZF1 889 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 ETAA1Q9NY74 926 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 PHTF1Q9UMS5 762 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 FSCN2O14926 492 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 CBX6O95503 412 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 CYP1A2P05177 515 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 MAN1A1P33908 653 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 QARSP47897 775 aaKnown RBP12.55□□□□□ -0.4
ABCA3-203ENST00000563623 GPS1Q13098 491 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 LONP2Q86WA8 852 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 ADAM22Q9P0K1 906 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 SCAF8Q9UPN6 1271 aaKnown RBP12.55□□□□□ -0.4
ABCA3-203ENST00000563623 PCDHB4Q9Y5E5 795 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 SMCHD1A6NHR9 2005 aa12.55□□□□□ -0.4
ABCA3-203ENST00000563623 ATP8B3O60423 1300 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 YWHABP31946 246 aaKnown RBP12.54□□□□□ -0.4
ABCA3-203ENST00000563623 RIPK1Q13546 671 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 SIX1Q15475 284 aaPredicted RBP12.54□□□□□ -0.4
ABCA3-203ENST00000563623 USP37Q86T82 979 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 ZBED8Q8IZ13 594 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.54□□□□□ -0.4
ABCA3-203ENST00000563623 CERKQ8TCT0 537 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 CFAP57Q96MR6 1250 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 PPP1R12CQ9BZL4 782 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 CCDC134Q9H6E4 229 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 ETS1P14921 441 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 CNGA1P29973 690 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 RARRES1P49788 294 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 OVGP1Q12889 678 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 DMP1Q13316 513 aaPredicted RBP12.54□□□□□ -0.4
ABCA3-203ENST00000563623 STAT4Q14765 748 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 PKN2Q16513 984 aaKnown RBP12.54□□□□□ -0.4
ABCA3-203ENST00000563623 ATP13A4Q4VNC1 1196 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 SPOPLQ6IQ16 392 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 TLDC1Q6P9B6 456 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 SHC3Q92529 594 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 ZDHHC15Q96MV8 337 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 ZNF570Q96NI8 536 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 MXRA8Q9BRK3 442 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 NPHS2Q9NP85 383 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 SGK1O00141 431 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 ATP2A1O14983 1001 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 KRT1P04264 644 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 TAC1P20366 129 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 ARSEP51690 589 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 NOP14P78316 857 aaKnown RBP12.54□□□□□ -0.4
ABCA3-203ENST00000563623 CYP1B1Q16678 543 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 SV2AQ7L0J3 742 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 SLC9A9Q8IVB4 645 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 GMCL1P1Q8NEA9 526 aa12.54□□□□□ -0.4
ABCA3-203ENST00000563623 NEU2Q9Y3R4 380 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms