RNA–Protein interactions for RNA: ENST00000563522.5

PDXDC1-208, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-208ENST00000563522 ADPGKQ9BRR6 497 aa9.03□□□□□ -0.96
PDXDC1-208ENST00000563522 RPP25Q9BUL9 199 aaKnown RBP9.03□□□□□ -0.96
PDXDC1-208ENST00000563522 SLC6A16Q9GZN6 736 aa9.03□□□□□ -0.96
PDXDC1-208ENST00000563522 PDZD7Q9H5P4 517 aa9.03□□□□□ -0.96
PDXDC1-208ENST00000563522 TUFT1Q9NNX1 390 aa9.03□□□□□ -0.96
PDXDC1-208ENST00000563522 AVENQ9NQS1 362 aaPredicted RBP9.03□□□□□ -0.96
PDXDC1-208ENST00000563522 GDE1Q9NZC3 331 aa9.03□□□□□ -0.96
PDXDC1-208ENST00000563522 MRPS17Q9Y2R5 130 aaKnown RBP9.03□□□□□ -0.96
PDXDC1-208ENST00000563522 DCHS1Q96JQ0 3298 aa9.03□□□□□ -0.96
PDXDC1-208ENST00000563522 FAM170BA6NMN3 283 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 ACKR2O00590 384 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 NCAM2O15394 837 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 CCL16O15467 120 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 TRAPPC3O43617 180 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 RECQL4O94761 1208 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 CTDNEP1O95476 244 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 S1PR4O95977 384 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 SPATA31C1P0DKV0 1188 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 OR1D2P34982 312 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 TXKP42681 527 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 NAMPTP43490 491 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 EFNA5P52803 228 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 NTHL1P78549 312 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 PRPF4BQ13523 1007 aaKnown RBP9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 SNW1Q13573 536 aaKnown RBP9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 PPP2R5AQ15172 486 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 TMEM132AQ24JP5 1023 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 DCAF4L1Q3SXM0 396 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 PABPC1LQ4VXU2 614 aaKnown RBP9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 ZBTB41Q5SVQ8 909 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 AXDND1Q5T1B0 1012 aaPredicted RBP9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 ANKS3Q6ZW76 656 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 NPAS3Q8IXF0 933 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 ITFG1Q8TB96 612 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 SLC7A14Q8TBB6 771 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 HASPINQ8TF76 798 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 ATRIPQ8WXE1 791 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 NELL1Q92832 810 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 SECISBP2LQ93073 1101 aaKnown RBP9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 UROC1Q96N76 676 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 NACC1Q96RE7 527 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 FAM126AQ9BYI3 521 aaPredicted RBP9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 CCDC113Q9H0I3 377 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 LTB4R2Q9NPC1 389 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 GPRC5CQ9NQ84 441 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 GJB4Q9NTQ9 266 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 SPATA6Q9NWH7 488 aaPredicted RBP9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 SNTG2Q9NY99 539 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 MTRRQ9UBK8 725 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 TPCN1Q9ULQ1 816 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 BACE2Q9Y5Z0 518 aa9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 EP300Q09472 2414 aaPredicted RBP9.02□□□□□ -0.97
PDXDC1-208ENST00000563522 MED19A0JLT2 244 aaPredicted RBP9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 RNF223E7ERA6 249 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 ADAM12O43184 909 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 LILRB5O75023 590 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 MICAL2O94851 1124 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 PRKCBP05771 671 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 FDPSP14324 419 aaKnown RBP9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 CYP11B2P19099 503 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 ATP2B1P20020 1258 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 MUTP22033 750 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 ANAPC15P60006 121 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 ORC2Q13416 577 aaPredicted RBP9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 UBXN2BQ14CS0 331 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 ZNF852Q6ZMS4 543 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 CATSPER3Q86XQ3 398 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 ZBTB44Q8NCP5 570 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 ERMNQ8TAM6 284 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 DEPTORQ8TB45 409 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 DNASE1L2Q92874 299 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 PPP1R10Q96QC0 940 aaKnown RBP9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 KXD1Q9BQD3 176 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 IER2Q9BTL4 223 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 POLR3CQ9BUI4 534 aaPredicted RBP9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 EPC1Q9H2F5 836 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 ZSCAN32Q9NX65 697 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 NCDNQ9UBB6 729 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 DNMT3BQ9UBC3 853 aaKnown RBP9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 CACNG4Q9UBN1 327 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 POLIQ9UNA4 740 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 MRPS23Q9Y3D9 190 aaKnown RBP9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 DOCK8Q8NF50 2099 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 ARID2Q68CP9 1835 aa9.01□□□□□ -0.97
PDXDC1-208ENST00000563522 ARHGEF37A1IGU5 675 aa9□□□□□ -0.97
PDXDC1-208ENST00000563522 ARHGEF35A5YM69 484 aa9□□□□□ -0.97
PDXDC1-208ENST00000563522 PRR5-ARHGAP8B1AHC4 643 aa9□□□□□ -0.97
PDXDC1-208ENST00000563522 BTBD18B2RXH4 712 aa9□□□□□ -0.97
PDXDC1-208ENST00000563522 TBC1D4O60343 1298 aa9□□□□□ -0.97
PDXDC1-208ENST00000563522 LRRN2O75325 713 aa9□□□□□ -0.97
PDXDC1-208ENST00000563522 B3GAT3O94766 335 aa9□□□□□ -0.97
PDXDC1-208ENST00000563522 RHOP08100 348 aa9□□□□□ -0.97
PDXDC1-208ENST00000563522 RPA1P27694 616 aa9□□□□□ -0.97
PDXDC1-208ENST00000563522 USP46P62068 366 aa9□□□□□ -0.97
PDXDC1-208ENST00000563522 ARHGAP8P85298 464 aa9□□□□□ -0.97
PDXDC1-208ENST00000563522 CSTF1Q05048 431 aaKnown RBP9□□□□□ -0.97
PDXDC1-208ENST00000563522 TRIM29Q14134 588 aa9□□□□□ -0.97
PDXDC1-208ENST00000563522 SLC8B1Q6J4K2 584 aa9□□□□□ -0.97
PDXDC1-208ENST00000563522 MAEAQ7L5Y9 396 aa9□□□□□ -0.97
PDXDC1-208ENST00000563522 NOSTRINQ8IVI9 506 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms