RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 RGS18Q9NS28 235 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 RNF19AQ9NV58 838 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 TBX21Q9UL17 535 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 DERAQ9Y315 318 aa10.96□□□□□ -0.65
SMG1-208ENST00000563448 A0A0U1RQF3 1178 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 ZNF623O75123 536 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 CLTBP09497 229 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 SKILP12757 684 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 ATF7P17544 494 aaPredicted RBP10.96□□□□□ -0.66
SMG1-208ENST00000563448 EN2P19622 333 aaPredicted RBP10.96□□□□□ -0.66
SMG1-208ENST00000563448 HNRNPH3P31942 346 aaKnown RBP10.96□□□□□ -0.66
SMG1-208ENST00000563448 CYP2C18P33260 490 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 RAB27AP51159 221 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 GUCY2FP51841 1108 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 CCL23P55773 120 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 NCOA4Q13772 614 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 TCTN1Q2MV58 587 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 PLEKHG4Q58EX7 1191 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 GLRA4Q5JXX5 417 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 SPOPLQ6IQ16 392 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 AGMOQ6ZNB7 445 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 CCDC112Q8NEF3 446 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 NT5C1BQ96P26 610 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 STK33Q9BYT3 514 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 APOBEC3GQ9HC16 384 aaKnown RBP10.96□□□□□ -0.66
SMG1-208ENST00000563448 UBE2TQ9NPD8 197 aaPredicted RBP10.96□□□□□ -0.66
SMG1-208ENST00000563448 SIX4Q9UIU6 781 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 PYCARDQ9ULZ3 195 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 PLAGL2Q9UPG8 496 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 ZKSCAN5Q9Y2L8 839 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 DAAM1Q9Y4D1 1078 aa10.96□□□□□ -0.66
SMG1-208ENST00000563448 SMIM28A0A1B0GU29 152 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 ITGB3P05106 788 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 KCNE1P15382 129 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 RFX1P22670 979 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 MYL6P60660 151 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 RAPGEF1Q13905 1077 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 DRAP1Q14919 205 aaPredicted RBP10.95□□□□□ -0.66
SMG1-208ENST00000563448 MEA1Q16626 185 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 ARHGAP44Q17R89 818 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 UBE2Q1Q7Z7E8 422 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 DBF4BQ8NFT6 615 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 KREMEN1Q96MU8 473 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 SPAG5Q96R06 1193 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 CHP1Q99653 195 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 TMEM39AQ9NV64 488 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 DPP3Q9NY33 737 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 MYO6Q9UM54 1294 aa10.95□□□□□ -0.66
SMG1-208ENST00000563448 C9IYK1 514 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 PTGESO14684 152 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 ASS1P00966 412 aaKnown RBP10.94□□□□□ -0.66
SMG1-208ENST00000563448 CXCL10P02778 98 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 PNMA6AP0CW24 399 aaPredicted RBP10.94□□□□□ -0.66
SMG1-208ENST00000563448 TRPC3Q13507 836 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 WDR44Q5JSH3 913 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 SFMBT2Q5VUG0 894 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 ZNF598Q86UK7 904 aaKnown RBP10.94□□□□□ -0.66
SMG1-208ENST00000563448 ECHDC2Q86YB7 292 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 HACE1Q8IYU2 909 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 PPM1KQ8N3J5 372 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 GSTCDQ8NEC7 633 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 SYN2Q92777 582 aaPredicted RBP10.94□□□□□ -0.66
SMG1-208ENST00000563448 C18orf25Q96B23 403 aaPredicted RBP10.94□□□□□ -0.66
SMG1-208ENST00000563448 FTHL17Q9BXU8 183 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 NUCKS1Q9H1E3 243 aaKnown RBP10.94□□□□□ -0.66
SMG1-208ENST00000563448 MIOSQ9NXC5 875 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 AIPL1Q9NZN9 384 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 TUBGCP4Q9UGJ1 667 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 GIT1Q9Y2X7 761 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 NUB1Q9Y5A7 615 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 SOWAHDA6NJG2 315 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 F8VZ95 297 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 FOXN3O00409 490 aaPredicted RBP10.94□□□□□ -0.66
SMG1-208ENST00000563448 KRT19P08727 400 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 SKIP12755 728 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 IBSPP21815 317 aaPredicted RBP10.94□□□□□ -0.66
SMG1-208ENST00000563448 POLR2BP30876 1174 aaKnown RBP10.94□□□□□ -0.66
SMG1-208ENST00000563448 MFAP3P55082 362 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 NOP14P78316 857 aaKnown RBP10.94□□□□□ -0.66
SMG1-208ENST00000563448 FAM189BP81408 668 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 MTF1Q14872 753 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 SGSM1Q2NKQ1 1148 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 TSR1Q2NL82 804 aaKnown RBP10.94□□□□□ -0.66
SMG1-208ENST00000563448 HGSNATQ68CP4 663 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 RAD9BQ6WBX8 426 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 ZFP42Q96MM3 310 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 TSPAN18Q96SJ8 248 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 GAD1Q99259 594 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 XYLT2Q9H1B5 865 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 TSPYL2Q9H2G4 693 aaPredicted RBP10.94□□□□□ -0.66
SMG1-208ENST00000563448 C1orf112Q9NSG2 853 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 ITGA11Q9UKX5 1188 aa10.94□□□□□ -0.66
SMG1-208ENST00000563448 UBQLN1Q9UMX0 589 aaKnown RBP10.94□□□□□ -0.66
SMG1-208ENST00000563448 TSC2P49815 1807 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 TRIM43BA6NCK2 446 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 ENPP3O14638 875 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 ARHGAP6O43182 974 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 PARNO95453 639 aaKnown RBP10.93□□□□□ -0.66
SMG1-208ENST00000563448 PLEKP08567 350 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms