RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 CCDC94Q9BW85 323 aaPredicted RBP18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 MRPL4Q9BYD3 311 aaKnown RBP18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 SEMA4AQ9H3S1 761 aa18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 DAXXQ9UER7 740 aaPredicted RBP18.42■□□□□ 0.54
HDGFL3-203ENST00000563404 ARHGEF37A1IGU5 675 aa18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 KCNE1P15382 129 aa18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 CEBPBP17676 345 aa18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 CD72P21854 359 aa18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 ID4P47928 161 aa18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 YARSP54577 528 aaKnown RBP18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 MRPL58Q14197 206 aaKnown RBP18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 APBB1IPQ7Z5R6 666 aaPredicted RBP18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 FAM184AQ8NB25 1140 aa18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 ZNF461Q8TAF7 563 aa18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 ZSCAN31Q96LW9 406 aaPredicted RBP18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 KMT5AQ9NQR1 393 aa18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 AVENQ9NQS1 362 aaPredicted RBP18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 TOPORSQ9NS56 1045 aaPredicted RBP18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 CNTN3Q9P232 1028 aa18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 DNM3Q9UQ16 869 aa18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 MRPS23Q9Y3D9 190 aaKnown RBP18.41■□□□□ 0.54
HDGFL3-203ENST00000563404 SHISA7A6NL88 538 aa18.4■□□□□ 0.54
HDGFL3-203ENST00000563404 SFI1A8K8P3 1242 aa18.4■□□□□ 0.54
HDGFL3-203ENST00000563404 SLC16A4O15374 487 aa18.4■□□□□ 0.54
HDGFL3-203ENST00000563404 SEC24AO95486 1093 aa18.4■□□□□ 0.54
HDGFL3-203ENST00000563404 MCF2P10911 925 aa18.4■□□□□ 0.54
HDGFL3-203ENST00000563404 FOXK2Q01167 660 aa18.4■□□□□ 0.54
HDGFL3-203ENST00000563404 PRKCQQ04759 706 aa18.4■□□□□ 0.54
HDGFL3-203ENST00000563404 DMP1Q13316 513 aaPredicted RBP18.4■□□□□ 0.54
HDGFL3-203ENST00000563404 PRSS36Q5K4E3 855 aa18.4■□□□□ 0.54
HDGFL3-203ENST00000563404 TCEAL4Q96EI5 215 aa18.4■□□□□ 0.54
HDGFL3-203ENST00000563404 SLC38A7Q9NVC3 462 aa18.4■□□□□ 0.54
HDGFL3-203ENST00000563404 STK24Q9Y6E0 443 aa18.4■□□□□ 0.54
HDGFL3-203ENST00000563404 FANCMQ8IYD8 2048 aa18.4■□□□□ 0.54
HDGFL3-203ENST00000563404 FAM170BA6NMN3 283 aa18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 ECI2O75521 394 aa18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 HARSP12081 509 aaKnown RBP18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 ARPP19P56211 112 aa18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 UBXN2BQ14CS0 331 aa18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 SEZ6Q53EL9 994 aa18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 KRT79Q5XKE5 535 aa18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 TANGO2Q6ICL3 276 aa18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 MPZL3Q6UWV2 235 aa18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 DRC1Q96MC2 740 aa18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 ACAP3Q96P50 834 aa18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 LTB4R2Q9NPC1 389 aa18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 SH2B1Q9NRF2 756 aaPredicted RBP18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 GDE1Q9NZC3 331 aa18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 FBXL5Q9UKA1 691 aa18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 RBM19Q9Y4C8 960 aaKnown RBP18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 MIA3Q5JRA6 1907 aa18.39■□□□□ 0.53
HDGFL3-203ENST00000563404 OTOGLQ3ZCN5 2332 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 SYN3O14994 580 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 ATF2P15336 505 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 PTPN2P17706 415 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 FCARP24071 287 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 CCR2P41597 374 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 PFKPQ01813 784 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 RAD51AP2Q09MP3 1159 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 SLC10A6Q3KNW5 377 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 TCEAL8Q8IYN2 117 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 PNMA5Q96PV4 448 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 CORO1BQ9BR76 489 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 NTPCRQ9BSD7 190 aaKnown RBP18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 TCHPQ9BT92 498 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 OSBPL6Q9BZF3 934 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 RAB34Q9BZG1 259 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 CYP4F11Q9HBI6 524 aa18.38■□□□□ 0.53
HDGFL3-203ENST00000563404 CACNA1AO00555 2505 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 LAD1O00515 517 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 LRG1P02750 347 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 GUCY2CP25092 1073 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 TARSP26639 723 aaKnown RBP18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 ELF1P32519 619 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 RPL9P32969 192 aaKnown RBP18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 PRPHP41219 470 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 ZC3H14Q6PJT7 736 aaKnown RBP18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 DTHD1Q6ZMT9 781 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 TPRG1Q6ZUI0 275 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 KIAA2013Q8IYS2 634 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 DCLK2Q8N568 766 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 SUMF1Q8NBK3 374 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 TMEM161BQ8NDZ6 487 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 RMDN1Q96DB5 314 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 SUSD3Q96L08 255 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 BCO2Q9BYV7 579 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 HAPLN2Q9GZV7 340 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 C17orf75Q9HAS0 396 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 HEBP1Q9NRV9 189 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 SPATA6Q9NWH7 488 aaPredicted RBP18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 TUBGCP4Q9UGJ1 667 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 INSL5Q9Y5Q6 135 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 PATJQ8NI35 1801 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 GPR179Q6PRD1 2367 aa18.37■□□□□ 0.53
HDGFL3-203ENST00000563404 H7C4K7 107 aa18.36■□□□□ 0.53
HDGFL3-203ENST00000563404 PRRG1O14668 218 aa18.36■□□□□ 0.53
HDGFL3-203ENST00000563404 MOSPD3O75425 235 aa18.36■□□□□ 0.53
HDGFL3-203ENST00000563404 FZD5Q13467 585 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms