RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 FAM234BA2RU67 622 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 F8W735 103 aaPredicted RBP5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 WNT9AO14904 365 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 TNFRSF6BO95407 300 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 LPLP06858 475 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 NTF4P34130 210 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 CCR5P51681 352 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 ZNF132P52740 706 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 IFI35P80217 286 aaPredicted RBP5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 IRF9Q00978 393 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 TLE2Q04725 743 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 SNW1Q13573 536 aaKnown RBP5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 CUL4AQ13619 759 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 PTK2BQ14289 1009 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 E2F5Q15329 346 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 DUOXA2Q1HG44 320 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 SLC9C2Q5TAH2 1124 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 ANGEL2Q5VTE6 544 aaKnown RBP5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 PRAMEF13Q5VWM6 474 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 GALNT17Q6IS24 598 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 OSTM1Q86WC4 334 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 CHD1LQ86WJ1 897 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 C2CD5Q86YS7 1000 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 CREG2Q8IUH2 290 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 HERC6Q8IVU3 1022 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 OXR1Q8N573 874 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 STT3BQ8TCJ2 826 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 STYXQ8WUJ0 223 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 CYB5D2Q8WUJ1 264 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 ANKS1AQ92625 1134 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 VWCEQ96DN2 955 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 COLEC11Q9BWP8 271 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 BRIP1Q9BX63 1249 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 PRDM12Q9H4Q4 367 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 ACAD9Q9H845 621 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 ZWILCHQ9H900 591 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 DIAPH3Q9NSV4 1193 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 SRP68Q9UHB9 627 aaKnown RBP5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 EIF2B4Q9UI10 523 aaKnown RBP5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 FEM1BQ9UK73 627 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 OGDHLQ9ULD0 1010 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 PCDHGB4Q9UN71 923 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 SCAF8Q9UPN6 1271 aaKnown RBP5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 PCDHB12Q9Y5F1 795 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 PCDHGC5Q9Y5F6 944 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 USP6P35125 1406 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 STXBP3O00186 592 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 MEFVO15553 781 aaPredicted RBP5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 DYRK3O43781 588 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 PTP4A3O75365 173 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 GJB3O75712 270 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 FSBPO95073 299 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 KRT1P04264 644 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 KITP10721 976 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 ALOX15P16050 662 aaPredicted RBP5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 GLB1P16278 677 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 PORP16435 677 aaPredicted RBP5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 PDE6AP16499 860 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 KRT15P19012 456 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 KIF11P52732 1056 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 UBASH3AP57075 661 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 JAM2P57087 298 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 MOGSQ13724 837 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 RASA2Q15283 850 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 UGT8Q16880 541 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 CCDC157Q569K6 752 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 FAM26FQ5R3K3 315 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 ACAD11Q709F0 780 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 BTN2A1Q7KYR7 527 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 TSPYL6Q8N831 410 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 RUBCNQ92622 972 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 KAT5Q92993 513 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 NCAPGQ9BPX3 1015 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 CARD10Q9BWT7 1032 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 SMURF1Q9HCE7 757 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 WDR35Q9P2L0 1181 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 CPNE7Q9UBL6 633 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 HERC5Q9UII4 1024 aaKnown RBP5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 MINPP1Q9UNW1 487 aa5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 RRP7AQ9Y3A4 280 aaKnown RBP5.79□□□□□ -1.48
VPS35P1-201ENST00000563400 NPC1L1Q9UHC9 1359 aa5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 AHDC1Q5TGY3 1603 aaPredicted RBP5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 QRICH2Q9H0J4 1663 aa5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 SETD1AO15047 1707 aaKnown RBP5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 ARHGEF28Q8N1W1 1705 aaKnown RBP5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 SLC12A8A0AV02 714 aa5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 SGPL1O95470 568 aa5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 FTLP02792 175 aaPredicted RBP5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 MT-ND3P03897 115 aa5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 RPL17P18621 184 aaKnown RBP5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 ITIH2P19823 946 aa5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 FGFR4P22455 802 aa5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 PEX19P40855 299 aa5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 SEC24CP53992 1094 aa5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 RBM6P78332 1123 aaKnown RBP5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 CCT2P78371 535 aaKnown RBP5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 LACTBP83111 547 aaPredicted RBP5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 PPARDQ03181 441 aa5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 C19orf57Q0VDD7 668 aa5.78□□□□□ -1.48
VPS35P1-201ENST00000563400 IL10RAQ13651 578 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms