RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	MRPS23	Q9Y3D9	190 aa	Known RBP	9.22	□□□□□ -0.93
CKLF-208	ENST00000563092	VWA8	A3KMH1	1905 aa		9.22	□□□□□ -0.93
CKLF-208	ENST00000563092	F5	P12259	2224 aa		9.21	□□□□□ -0.93
CKLF-208	ENST00000563092	CACNA1G	O43497	2377 aa		9.21	□□□□□ -0.93
CKLF-208	ENST00000563092	FAM208B	Q5VWN6	2430 aa		9.21	□□□□□ -0.93
CKLF-208	ENST00000563092	CASTOR2	A6NHX0	329 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092		K7ESF4	209 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	GDF9	O60383	454 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	DGAT1	O75907	488 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	TH	P07101	528 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	CEBPB	P17676	345 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	RPS6KB1	P23443	525 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	PPP2R5D	Q14738	602 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	INF2	Q27J81	1249 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	WDR44	Q5JSH3	913 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	FAM78A	Q5JUQ0	283 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	KRT25	Q7Z3Z0	450 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	CDR2L	Q86X02	465 aa	Predicted RBP	9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	CEP57	Q86XR8	500 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	ZNF461	Q8TAF7	563 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	HASPIN	Q8TF76	798 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	MCRS1	Q96EZ8	462 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	DDX27	Q96GQ7	796 aa	Known RBP	9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	DYDC2	Q96IM9	177 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	ASB16	Q96NS5	453 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	NCOA5	Q9HCD5	579 aa	Known RBP	9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	ANGPTL2	Q9UKU9	493 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	RAB23	Q9ULC3	237 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	NAP1L2	Q9ULW6	460 aa	Predicted RBP	9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	POLI	Q9UNA4	740 aa		9.21	□□□□□ -0.94
CKLF-208	ENST00000563092	WDR27	A2RRH5	827 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	MOSPD3	O75425	235 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	RECQL4	O94761	1208 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	DEXI	O95424	95 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	PTPN2	P17706	415 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	HSPA4	P34932	840 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	CCR2	P41597	374 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	CXCL12	P48061	93 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	RARRES1	P49788	294 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	EPHA5	P54756	1037 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	FGD1	P98174	961 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	SATB1	Q01826	763 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	DMWD	Q09019	674 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	PTGDR	Q13258	359 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	SIM2	Q14190	667 aa	Predicted RBP	9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	CTTN	Q14247	550 aa	Known RBP	9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	LPAL2	Q16609	132 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	BLOC1S2	Q6QNY1	142 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	VIT	Q6UXI7	678 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	NEK8	Q86SG6	692 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	LONP2	Q86WA8	852 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	TCEAL8	Q8IYN2	117 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	SPEM1	Q8N4L4	309 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	FAM3C	Q92520	227 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	IRF7	Q92985	503 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	PPP1R10	Q96QC0	940 aa	Known RBP	9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	TRMT61B	Q9BVS5	477 aa	Known RBP	9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	PDZD7	Q9H5P4	517 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	LMAN1L	Q9HAT1	526 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	ZFP14	Q9HCL3	533 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	PARP2	Q9UGN5	583 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	SNX14	Q9Y5W7	946 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	CDY1	Q9Y6F8	540 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	NCAN	O14594	1321 aa		9.2	□□□□□ -0.94
CKLF-208	ENST00000563092	WDFY3	Q8IZQ1	3526 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	XRCC6	P12956	609 aa	Known RBP eCLIP	9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	ATF2	P15336	505 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	PSMC3	P17980	439 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	CCT2	P78371	535 aa	Known RBP	9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	ROR1	Q01973	937 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	CYP4A11	Q02928	519 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	SSRP1	Q08945	709 aa	Known RBP	9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	TOB2	Q14106	344 aa	Predicted RBP	9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	MRPL58	Q14197	206 aa	Known RBP	9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	GRM2	Q14416	872 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	UPP1	Q16831	310 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	XKR4	Q5GH76	650 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	ANKS3	Q6ZW76	656 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	TRIM22	Q8IYM9	498 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	C3orf58	Q8NDZ4	430 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	DEPDC1B	Q8WUY9	529 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	SMARCD2	Q92925	531 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	TCEAL4	Q96EI5	215 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	MSANTD3	Q96H12	275 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	CHAMP1	Q96JM3	812 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	ZSWIM3	Q96MP5	696 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	JAKMIP1	Q96N16	626 aa	Known RBP	9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	AIFM3	Q96NN9	605 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	EIF2AK1	Q9BQI3	630 aa	Known RBP	9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	LARP6	Q9BRS8	491 aa	Known RBP	9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	CCDC113	Q9H0I3	377 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	BRD9	Q9H8M2	597 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	PRMT7	Q9NVM4	692 aa	Predicted RBP	9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	SNTG2	Q9NY99	539 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	NDRG2	Q9UN36	371 aa	Known RBP	9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	PIAS3	Q9Y6X2	628 aa		9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	CNOT1	A5YKK6	2376 aa	Known RBP	9.19	□□□□□ -0.94
CKLF-208	ENST00000563092	LAMA1	P25391	3075 aa		9.18	□□□□□ -0.94
CKLF-208	ENST00000563092	CHURC1-FNTB	B4DL54	471 aa		9.18	□□□□□ -0.94

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