RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 TNPO2O14787 897 aaKnown RBP10.09□□□□□ -0.79
LINC00838-201ENST00000562956 ATMINO43313 823 aaPredicted RBP10.09□□□□□ -0.79
LINC00838-201ENST00000562956 ZEB2O60315 1214 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 SEC31AO94979 1220 aaKnown RBP10.09□□□□□ -0.79
LINC00838-201ENST00000562956 KIF4AO95239 1232 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 F2P00734 622 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 SMIM10L2AP0DMW4 78 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 SMIM10L2BP0DMW5 78 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 GZMAP12544 262 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 ARF4P18085 180 aaPredicted RBP10.09□□□□□ -0.79
LINC00838-201ENST00000562956 AP3M2P53677 418 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 MYL6P60660 151 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 TMEM62Q0P6H9 643 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 RPS6KA1Q15418 735 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 CCDC181Q5TID7 509 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 SPATA4Q8NEY3 305 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 SCLT1Q96NL6 688 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 APBA2Q99767 749 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 ABT1Q9ULW3 272 aaKnown RBP10.09□□□□□ -0.79
LINC00838-201ENST00000562956 STXBP5LQ9Y2K9 1186 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 KCNK3O14649 394 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 ASS1P00966 412 aaKnown RBP10.09□□□□□ -0.79
LINC00838-201ENST00000562956 IGHA2P01877 340 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 FGFR4P22455 802 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 BEX3Q00994 111 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 IRF5Q13568 498 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 HIC1Q14526 733 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 KIZQ2M2Z5 673 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 PEX26Q7Z412 305 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 NT5DC3Q86UY8 548 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 TMEM130Q8N3G9 435 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 FAM49AQ9H0Q0 323 aaPredicted RBP10.09□□□□□ -0.79
LINC00838-201ENST00000562956 RAB21Q9UL25 225 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 B4GALT4O60513 344 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 TSPAN1O60635 241 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 STAG3L1P0CL83 205 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 VSNL1P62760 191 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 GPC5P78333 572 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 SREBF2Q12772 1141 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 SURF1Q15526 300 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 CC2D1AQ6P1N0 951 aaPredicted RBP10.08□□□□□ -0.8
LINC00838-201ENST00000562956 TMEM270Q6UE05 265 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 SYCE1Q8N0S2 351 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 SOCS4Q8WXH5 440 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 RPF1Q9H9Y2 349 aaKnown RBP10.08□□□□□ -0.8
LINC00838-201ENST00000562956 ABCB6Q9NP58 842 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 FEZ2Q9UHY8 353 aaPredicted RBP10.08□□□□□ -0.8
LINC00838-201ENST00000562956 PCDHB4Q9Y5E5 795 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 PCDHB2Q9Y5E7 798 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 RRN3P2A6NIE6 340 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 CFHP08603 1231 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 NFICP08651 508 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 TMEM191BP0C7N4 346 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 MCF2P10911 925 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 TBXAS1P24557 533 aaPredicted RBP10.08□□□□□ -0.8
LINC00838-201ENST00000562956 PAFAH1B1P43034 410 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 RNASE9P60153 205 aaKnown RBP10.08□□□□□ -0.8
LINC00838-201ENST00000562956 MFSD10Q14728 455 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 CLEC16AQ2KHT3 1053 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 CFAP221Q4G0U5 840 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 TMCO3Q6UWJ1 677 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 RHOT2Q8IXI1 618 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 C10orf67Q8IYJ2 551 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 TAF4BQ92750 862 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 CCDC102AQ96A19 550 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 IMPG2Q9BZV3 1241 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 ARHGAP39Q9C0H5 1083 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 ADAMTS10Q9H324 1103 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 CDHR5Q9HBB8 845 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 CTTNBP2NLQ9P2B4 639 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 GINS2Q9Y248 185 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 MYH10P35580 1976 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 NRCAMQ92823 1304 aa10.08□□□□□ -0.8
LINC00838-201ENST00000562956 LACTBL1A8MY62 500 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 TRIM66O15016 1216 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 ZRANB2O95218 330 aaKnown RBP eCLIP10.07□□□□□ -0.8
LINC00838-201ENST00000562956 ITIH3Q06033 890 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 ACAD10Q6JQN1 1059 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 RUFY4Q6ZNE9 571 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 RBBP8NLQ8NC74 664 aaPredicted RBP10.07□□□□□ -0.8
LINC00838-201ENST00000562956 HES6Q96HZ4 224 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 XYLT2Q9H1B5 865 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 RBM12Q9NTZ6 932 aaKnown RBP10.07□□□□□ -0.8
LINC00838-201ENST00000562956 RNF14Q9UBS8 474 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 RSPH14Q9UHP6 348 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 CNTN6Q9UQ52 1028 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 CCDC151A5D8V7 595 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 GPR32O75388 356 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 ERLIN2O94905 339 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 IL18RAPO95256 599 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 MYL3P08590 195 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 UNGP13051 313 aaPredicted RBP10.07□□□□□ -0.8
LINC00838-201ENST00000562956 SSTR3P32745 418 aaPredicted RBP10.07□□□□□ -0.8
LINC00838-201ENST00000562956 TM4SF4P48230 202 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 GYS2P54840 703 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 HADHBP55084 474 aaKnown RBP10.07□□□□□ -0.8
LINC00838-201ENST00000562956 BPIFB4P59827 614 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 MRPS25P82663 173 aaKnown RBP10.07□□□□□ -0.8
LINC00838-201ENST00000562956 TRPC3Q13507 836 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 TCEAL1Q15170 157 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms