RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 CRELD2Q6UXH1 353 aaPredicted RBP16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 EPM2AIP1Q7L775 607 aaPredicted RBP16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 SYCP3Q8IZU3 236 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 GJD3Q8N144 294 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 TMEM87AQ8NBN3 555 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 RIN2Q8WYP3 895 aaPredicted RBP16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 FAM212AQ96EL1 285 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 KIF12Q96FN5 646 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 APOL5Q9BWW9 433 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 ARIH1Q9Y4X5 557 aaPredicted RBP16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 TEX28O15482 410 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 RPL17P18621 184 aaKnown RBP16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 KLRC2P26717 231 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 CLCN4P51793 760 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 ZBTB6Q15916 424 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 CEP57Q86XR8 500 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 FEZF2Q8TBJ5 459 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 CASP10Q92851 521 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 SAAL1Q96ER3 474 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 CBWD1Q9BRT8 395 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 LRFN3Q9BTN0 628 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 EMILIN2Q9BXX0 1053 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 RXFP1Q9HBX9 757 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 PRKAG3Q9UGI9 489 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 USP25Q9UHP3 1055 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 CDH22Q9UJ99 828 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 FAM50BQ9Y247 325 aa16.73■□□□□ 0.27
CCNDBP1-203ENST00000562553 SCN1AP35498 2009 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 C2orf16Q68DN1 1984 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 PVALEFA0A1B0GWK0 134 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 EIF3DO15371 548 aaKnown RBP eCLIP16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 NFICP08651 508 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 PRR29P0C7W0 189 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 SRGAP2BP0DMP2 458 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 WNT7BP56706 349 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 POSTNQ15063 836 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 SMAD2Q15796 467 aaKnown RBP16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 TMEM31Q5JXX7 168 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 JADE1Q6IE81 842 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 KANK3Q6NY19 840 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 GLYCTKQ8IVS8 523 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 DDX27Q96GQ7 796 aaKnown RBP16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 TTPALQ9BTX7 342 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 S1PR5Q9H228 398 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 PCIF1Q9H4Z3 704 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 TMEM206Q9H813 350 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 SLC39A2Q9NP94 309 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 RAPGEFL1Q9UHV5 662 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 UBQLN1Q9UMX0 589 aaKnown RBP16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 SSX2IPQ9Y2D8 614 aa16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 USP15Q9Y4E8 981 aaPredicted RBP16.72■□□□□ 0.27
CCNDBP1-203ENST00000562553 GOLGA8IPA6NC78 632 aa16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 GOLGA8JA6NMD2 632 aa16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 GARTP22102 1010 aa16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 FGFR3P22607 806 aa16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 TKTP29401 623 aaKnown RBP16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 RPL9P32969 192 aaKnown RBP16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 ELAVL2Q12926 359 aaKnown RBP16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 KRBA2Q6ZNG9 492 aa16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 STXBP4Q6ZWJ1 553 aa16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 PPFIBP1Q86W92 1011 aa16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 NELFCDQ8IXH7 590 aa16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 C12orf76Q8N812 135 aaPredicted RBP16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 LNX1Q8TBB1 728 aaPredicted RBP16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 ZNF507Q8TCN5 953 aa16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 SCFD1Q8WVM8 642 aa16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 PIK3R5Q8WYR1 880 aa16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 FAM213AQ9BRX8 229 aa16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 C11orf16Q9NQ32 467 aa16.71■□□□□ 0.27
CCNDBP1-203ENST00000562553 PPEF2O14830 753 aa16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 ZNF202O95125 648 aa16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 ADH1AP07327 375 aa16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 LRPAP1P30533 357 aa16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 PSMD5Q16401 504 aa16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 KMT5BQ4FZB7 885 aa16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 ARMCX5Q6P1M9 558 aa16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 CD302Q8IX05 232 aa16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 EFCAB13Q8IY85 973 aa16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 GPR65Q8IYL9 337 aa16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 SUSD6Q92537 303 aa16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 FBXL18Q96ME1 805 aa16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 FNIP2Q9P278 1114 aa16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 CIZ1Q9ULV3 898 aaPredicted RBP16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 UBE4BO95155 1302 aa16.7■□□□□ 0.26
CCNDBP1-203ENST00000562553 C19orf67A6NJJ6 358 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 ADAM12O43184 909 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 TGFB1I1O43294 461 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 WEE2P0C1S8 567 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 ALADP13716 330 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 HOXB8P17481 243 aaPredicted RBP16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 CYP3A5P20815 502 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 STK4Q13043 487 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 TMEM132DQ14C87 1099 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 RARS2Q5T160 578 aaKnown RBP16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 SPATA1Q5VX52 437 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 PALB2Q86YC2 1186 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 BRSK2Q8IWQ3 736 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 KIAA0895Q8NCT3 520 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms