RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 LMBRD1Q9NUN5 540 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 SSX2IPQ9Y2D8 614 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.13■□□□□ 0.49
CLK3-207ENST00000562389 ZNF233A6NK53 670 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 CXCL14O95715 111 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 URODP06132 367 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 GLUD2P49448 558 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 CYP2J2P51589 502 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 WNT7BP56706 349 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 DSG1Q02413 1049 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 DUSP6Q16828 381 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 USP41Q3LFD5 358 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 TAS1R1Q7RTX1 841 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 CBWD2Q8IUF1 395 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 SLC9A9Q8IVB4 645 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 EFCAB13Q8IY85 973 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 GPR65Q8IYL9 337 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 NOC3LQ8WTT2 800 aaKnown RBP18.13■□□□□ 0.49
CLK3-207ENST00000562389 TLE6Q9H808 572 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 MRPL17Q9NRX2 175 aaKnown RBP18.13■□□□□ 0.49
CLK3-207ENST00000562389 COG5Q9UP83 839 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 TRAF3IP3Q9Y228 551 aa18.13■□□□□ 0.49
CLK3-207ENST00000562389 CALUO43852 315 aaPredicted RBP18.12■□□□□ 0.49
CLK3-207ENST00000562389 LILRB3O75022 631 aa18.12■□□□□ 0.49
CLK3-207ENST00000562389 CA8P35219 290 aa18.12■□□□□ 0.49
CLK3-207ENST00000562389 NRIP1P48552 1158 aa18.12■□□□□ 0.49
CLK3-207ENST00000562389 MYBPC2Q14324 1141 aa18.12■□□□□ 0.49
CLK3-207ENST00000562389 SNRNP35Q16560 246 aaKnown RBP18.12■□□□□ 0.49
CLK3-207ENST00000562389 NFIL3Q16649 462 aa18.12■□□□□ 0.49
CLK3-207ENST00000562389 KIAA0319Q5VV43 1072 aa18.12■□□□□ 0.49
CLK3-207ENST00000562389 RBM23Q86U06 439 aaKnown RBP18.12■□□□□ 0.49
CLK3-207ENST00000562389 SMYD4Q8IYR2 804 aaPredicted RBP18.12■□□□□ 0.49
CLK3-207ENST00000562389 EFHBQ8N7U6 833 aa18.12■□□□□ 0.49
CLK3-207ENST00000562389 AUTS2Q8WXX7 1259 aa18.12■□□□□ 0.49
CLK3-207ENST00000562389 PABPC5Q96DU9 382 aaKnown RBP18.12■□□□□ 0.49
CLK3-207ENST00000562389 DMAC2Q9NW81 257 aa18.12■□□□□ 0.49
CLK3-207ENST00000562389 MAN1B1Q9UKM7 699 aa18.12■□□□□ 0.49
CLK3-207ENST00000562389 MAPK8IP1Q9UQF2 711 aa18.12■□□□□ 0.49
CLK3-207ENST00000562389 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.11■□□□□ 0.49
CLK3-207ENST00000562389 GOLGA6L22H0YM25 854 aa18.11■□□□□ 0.49
CLK3-207ENST00000562389 TRAPPC3O43617 180 aa18.11■□□□□ 0.49
CLK3-207ENST00000562389 IGFBP6P24592 240 aaPredicted RBP18.11■□□□□ 0.49
CLK3-207ENST00000562389 GTF2F1P35269 517 aaKnown RBP eCLIP18.11■□□□□ 0.49
CLK3-207ENST00000562389 GUCY2FP51841 1108 aa18.11■□□□□ 0.49
CLK3-207ENST00000562389 SURF1Q15526 300 aa18.11■□□□□ 0.49
CLK3-207ENST00000562389 CTC1Q2NKJ3 1217 aa18.11■□□□□ 0.49
CLK3-207ENST00000562389 FAM171A1Q5VUB5 890 aa18.11■□□□□ 0.49
CLK3-207ENST00000562389 KIAA1841Q6NSI8 718 aa18.11■□□□□ 0.49
CLK3-207ENST00000562389 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.11■□□□□ 0.49
CLK3-207ENST00000562389 TMEM130Q8N3G9 435 aa18.11■□□□□ 0.49
CLK3-207ENST00000562389 HLA-CQ95604 372 aa18.11■□□□□ 0.49
CLK3-207ENST00000562389 TTPALQ9BTX7 342 aa18.11■□□□□ 0.49
CLK3-207ENST00000562389 IGFLR1Q9H665 355 aa18.11■□□□□ 0.49
CLK3-207ENST00000562389 UBE2ZQ9H832 354 aaPredicted RBP18.11■□□□□ 0.49
CLK3-207ENST00000562389 PDE11AQ9HCR9 933 aa18.11■□□□□ 0.49
CLK3-207ENST00000562389 PRDM6Q9NQX0 595 aa18.11■□□□□ 0.49
CLK3-207ENST00000562389 THEGQ9P2T0 379 aa18.11■□□□□ 0.49
CLK3-207ENST00000562389 COL6A3P12111 3177 aa18.11■□□□□ 0.49
CLK3-207ENST00000562389 EYSQ5T1H1 3165 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 PER2O15055 1255 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 EXOC3O60645 756 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 NR3C1P04150 777 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 PRCPP42785 496 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 BRCC3P46736 316 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 CYP24A1Q07973 514 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 ADAM15Q13444 863 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 ZCWPW2Q504Y3 356 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 RTP2Q5QGT7 225 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 C9orf57Q5W0N0 161 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 CACTINQ8WUQ7 758 aaKnown RBP18.1■□□□□ 0.49
CLK3-207ENST00000562389 B3GALT6Q96L58 329 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 EMILIN2Q9BXX0 1053 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 RXFP1Q9HBX9 757 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.1■□□□□ 0.49
CLK3-207ENST00000562389 CLDND1Q9NY35 253 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 NUB1Q9Y5A7 615 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 SCN1AP35498 2009 aa18.1■□□□□ 0.49
CLK3-207ENST00000562389 ANO9A1A5B4 782 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 PIRO00625 290 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 C2CD2LO14523 706 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 CLASP2O75122 1294 aaKnown RBP18.09■□□□□ 0.49
CLK3-207ENST00000562389 FGFR3P22607 806 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 PAX3P23760 479 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 MCM4P33991 863 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 AARSP49588 968 aaKnown RBP eCLIP18.09■□□□□ 0.49
CLK3-207ENST00000562389 CREMQ03060 361 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 KCNC3Q14003 757 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 MORC3Q14149 939 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 PSMD6Q15008 389 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 EDRF1Q3B7T1 1238 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 PDXDC1Q6P996 788 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 RDH13Q8NBN7 331 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 RIN2Q8WYP3 895 aaPredicted RBP18.09■□□□□ 0.49
CLK3-207ENST00000562389 PIK3R5Q8WYR1 880 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 SUSD3Q96L08 255 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 MFSD14AQ96MC6 490 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 KLHL5Q96PQ7 755 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 CLSTN2Q9H4D0 955 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 DPP3Q9NY33 737 aa18.09■□□□□ 0.49
CLK3-207ENST00000562389 FNIP2Q9P278 1114 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms