RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 SOD2P04179 222 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 URODP06132 367 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 EPB41P11171 864 aaKnown RBP15.15■□□□□ 0.02
IFT140-205ENST00000561954 BMP6P22004 513 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 IGFBP4P22692 258 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 PSMC2P35998 433 aaKnown RBP15.15■□□□□ 0.02
IFT140-205ENST00000561954 CLCNKBP51801 687 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 TFAMQ00059 246 aaKnown RBP15.15■□□□□ 0.02
IFT140-205ENST00000561954 FKBP3Q00688 224 aaKnown RBP15.15■□□□□ 0.02
IFT140-205ENST00000561954 SOX4Q06945 474 aaPredicted RBP15.15■□□□□ 0.02
IFT140-205ENST00000561954 SPAG1Q07617 926 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 SMC1AQ14683 1233 aaKnown RBP15.15■□□□□ 0.02
IFT140-205ENST00000561954 ZBTB6Q15916 424 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 KLHL40Q2TBA0 621 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 KLHL10Q6JEL2 608 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 FUT10Q6P4F1 479 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 DCLRE1AQ6PJP8 1040 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 RBM43Q6ZSC3 357 aaKnown RBP15.15■□□□□ 0.02
IFT140-205ENST00000561954 INTS8Q75QN2 995 aaKnown RBP15.15■□□□□ 0.02
IFT140-205ENST00000561954 NELFBQ8WX92 580 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 ZNF560Q96MR9 790 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 CGRRF1Q99675 332 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 TCF25Q9BQ70 676 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 HERC2P3Q9BVR0 1158 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 GOLGA2P5Q9HBQ8 144 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 ITGA11Q9UKX5 1188 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 CTNND2Q9UQB3 1225 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 SSX2IPQ9Y2D8 614 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 R3HCC1Q9Y3T6 440 aaKnown RBP15.15■□□□□ 0.02
IFT140-205ENST00000561954 NUB1Q9Y5A7 615 aa15.15■□□□□ 0.02
IFT140-205ENST00000561954 PDCD11Q14690 1871 aaKnown RBP15.14■□□□□ 0.01
IFT140-205ENST00000561954 ARHGEF37A1IGU5 675 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 RFXAPO00287 272 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 TULP1O00294 542 aaPredicted RBP15.14■□□□□ 0.01
IFT140-205ENST00000561954 DLATP10515 647 aaKnown RBP15.14■□□□□ 0.01
IFT140-205ENST00000561954 KRT13P13646 458 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 PNPLA4P41247 253 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 AP3M2P53677 418 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 CREMQ03060 361 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 ADAM9Q13443 819 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 DUOXA2Q1HG44 320 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 PDXDC1Q6P996 788 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 ZC3H3Q8IXZ2 948 aaKnown RBP15.14■□□□□ 0.01
IFT140-205ENST00000561954 EFCAB13Q8IY85 973 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 FAM186BQ8IYM0 893 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 RDH13Q8NBN7 331 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 ZSWIM2Q8NEG5 633 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 BCL7CQ8WUZ0 217 aaPredicted RBP15.14■□□□□ 0.01
IFT140-205ENST00000561954 MFSD14AQ96MC6 490 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 CEP63Q96MT8 703 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 PAAF1Q9BRP4 392 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 ZBP1Q9H171 429 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 NSUN3Q9H649 340 aaKnown RBP15.14■□□□□ 0.01
IFT140-205ENST00000561954 PDE11AQ9HCR9 933 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 MTCH2Q9Y6C9 303 aa15.14■□□□□ 0.01
IFT140-205ENST00000561954 PPP1R3GB7ZBB8 358 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 FGFR1OPO95684 399 aaKnown RBP15.13■□□□□ 0.01
IFT140-205ENST00000561954 CD44P16070 742 aaKnown RBP15.13■□□□□ 0.01
IFT140-205ENST00000561954 TNNI1P19237 187 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 GLUD2P49448 558 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 NLRP12P59046 1061 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 ADGRE1Q14246 886 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 SKOR2Q2VWA4 1001 aaPredicted RBP15.13■□□□□ 0.01
IFT140-205ENST00000561954 USP41Q3LFD5 358 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 CT47A1Q5JQC4 288 aaPredicted RBP15.13■□□□□ 0.01
IFT140-205ENST00000561954 KIAA1841Q6NSI8 718 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 SASS6Q6UVJ0 657 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.13■□□□□ 0.01
IFT140-205ENST00000561954 TMC7Q7Z402 723 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 GPR65Q8IYL9 337 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 RNF168Q8IYW5 571 aaPredicted RBP15.13■□□□□ 0.01
IFT140-205ENST00000561954 VPS52Q8N1B4 723 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 HASPINQ8TF76 798 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 CCDC127Q96BQ5 260 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 MTMR12Q9C0I1 747 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 INTS13Q9NVM9 706 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 DPP3Q9NY33 737 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 RWDD2AQ9UIY3 292 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 STXBP5LQ9Y2K9 1186 aa15.13■□□□□ 0.01
IFT140-205ENST00000561954 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.12■□□□□ 0.01
IFT140-205ENST00000561954 FSCN2O14926 492 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 STX10O60499 249 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 AKAP3O75969 853 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 CTSAP10619 480 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 DNAJB1P25685 340 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 CA8P35219 290 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 BFSP1Q12934 665 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 STX1AQ16623 288 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 SV2CQ496J9 727 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 PLPP4Q5VZY2 271 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 C9orf57Q5W0N0 161 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 ANKRD40Q6AI12 368 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 TTI2Q6NXR4 508 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 CAVIN1Q6NZI2 390 aaKnown RBP15.12■□□□□ 0.01
IFT140-205ENST00000561954 LRRC52Q8N7C0 313 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 TMC2Q8TDI7 906 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 MICAL1Q8TDZ2 1067 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 CDCA3Q99618 268 aaPredicted RBP15.12■□□□□ 0.01
IFT140-205ENST00000561954 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.12■□□□□ 0.01
IFT140-205ENST00000561954 MRPL17Q9NRX2 175 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms