RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 CNTN6Q9UQ52 1028 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 NUB1Q9Y5A7 615 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 CCDC66A2RUB6 948 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 TTI1O43156 1089 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 SPOPO43791 374 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 OPA1O60313 960 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 MYBL1P10243 752 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 CTNNA1P35221 906 aaKnown RBP10.5□□□□□ -0.73
SMG1-205ENST00000561947 CCNA1P78396 465 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 CENPCQ03188 943 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 ARHGAP1Q07960 439 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 HLTFQ14527 1009 aaKnown RBP eCLIP10.5□□□□□ -0.731e-7■□□□□ 9.5
SMG1-205ENST00000561947 SURF1Q15526 300 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 SEL1L2Q5TEA6 688 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 AADACL2Q6P093 401 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 TRIM72Q6ZMU5 477 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 SEC14L1Q92503 715 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 ERVK-5Q9HDB9 667 aa10.5□□□□□ -0.73
SMG1-205ENST00000561947 UMODL1Q5DID0 1318 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 MGAMO43451 1857 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 IQCA1LA6NCM1 817 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 PROZP22891 400 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 HSPA9P38646 679 aaKnown RBP10.49□□□□□ -0.73
SMG1-205ENST00000561947 ZNF792Q3KQV3 632 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 TMEM270Q6UE05 265 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 TSHZ1Q6ZSZ6 1077 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 ADAT2Q7Z6V5 191 aaKnown RBP10.49□□□□□ -0.73
SMG1-205ENST00000561947 DDX42Q86XP3 938 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMG1-205ENST00000561947 CPNE8Q86YQ8 564 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 RBBP8NLQ8NC74 664 aaPredicted RBP10.49□□□□□ -0.73
SMG1-205ENST00000561947 CPA5Q8WXQ8 436 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 ZIM3Q96PE6 472 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 RUFY1Q96T51 708 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 CELF4Q9BZC1 486 aaKnown RBP10.49□□□□□ -0.73
SMG1-205ENST00000561947 IMPG2Q9BZV3 1241 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 ERAP1Q9NZ08 941 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 CPSF3Q9UKF6 684 aaKnown RBP10.49□□□□□ -0.73
SMG1-205ENST00000561947 PCDHA3Q9Y5H8 950 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 UNCXA6NJT0 531 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 ACKR2O00590 384 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 ASS1P00966 412 aaKnown RBP10.49□□□□□ -0.73
SMG1-205ENST00000561947 GNA15P30679 374 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 NSFP46459 744 aaKnown RBP10.49□□□□□ -0.73
SMG1-205ENST00000561947 LAMC2Q13753 1193 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 CFAP58Q5T655 872 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 EFCAB12Q6NXP0 572 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 MPZL3Q6UWV2 235 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 GOLGA6L1Q8N7Z2 621 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 UBR7Q8N806 425 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 NLRP4Q96MN2 994 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 FZD8Q9H461 694 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 FAM114A2Q9NRY5 505 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMG1-205ENST00000561947 ANAPC7Q9UJX3 599 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 SLC45A1Q9Y2W3 748 aa10.49□□□□□ -0.73
SMG1-205ENST00000561947 UTP11Q9Y3A2 253 aaKnown RBP10.49□□□□□ -0.73
SMG1-205ENST00000561947 GOLGA8KD6RF30 607 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 INO80B-WBP1J3KQ70 363 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 PDHXO00330 501 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 ASAP2O43150 1006 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 PHF2O75151 1096 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 C22orf31O95567 290 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 GJB1P08034 283 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 CETPP11597 493 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 MAPK4P31152 587 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 LMAN1P49257 510 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 CLCN3P51790 818 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 DHX34Q14147 1143 aaKnown RBP10.48□□□□□ -0.73
SMG1-205ENST00000561947 ZNF484Q5JVG2 852 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 SCARA3Q6AZY7 606 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 TAPT1Q6NXT6 567 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 MON1BQ7L1V2 547 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 PNMA8AQ86V59 439 aaPredicted RBP10.48□□□□□ -0.73
SMG1-205ENST00000561947 IQCKQ8N0W5 287 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 ABRAQ8N0Z2 381 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 CYFIP2Q96F07 1278 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 INO80BQ9C086 356 aaPredicted RBP10.48□□□□□ -0.73
SMG1-205ENST00000561947 MTMR12Q9C0I1 747 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 RAB17Q9H0T7 212 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 NEUROG2Q9H2A3 272 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 PTPRHQ9HD43 1115 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 VTA1Q9NP79 307 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 MROH7Q68CQ1 1323 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 FAM187AA6NFU0 413 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 DAPK3O43293 454 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 CST3P01034 146 aaPredicted RBP10.48□□□□□ -0.73
SMG1-205ENST00000561947 GH1P01241 217 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 LGALS2P05162 132 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 PYGMP11217 842 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 RRM1P23921 792 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 ADORA2AP29274 412 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 ZNF132P52740 706 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 RWDD2BP57060 319 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 NOMO3P69849 1222 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 DR1Q01658 176 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 MBTD1Q05BQ5 628 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 DUOXA2Q1HG44 320 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 ZNF568Q3ZCX4 644 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 ATF7IP2Q5U623 682 aa10.48□□□□□ -0.73
SMG1-205ENST00000561947 PIK3R5Q8WYR1 880 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms