RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 CYP1A1P04798 512 aaPredicted RBP13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 MCF2P10911 925 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 UNGP13051 313 aaPredicted RBP13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 HSPA6P17066 643 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 CTNNA2P26232 953 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 TNFSF9P41273 254 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 TNNT3P45378 269 aaPredicted RBP13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 ZNF132P52740 706 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 EPHB4P54760 987 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 YWHAEP62258 255 aaKnown RBP13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 CENPCQ03188 943 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 PAK2Q13177 524 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 ACVR2BQ13705 512 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 TMEM132AQ24JP5 1023 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 RBBP8NLQ8NC74 664 aaPredicted RBP13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 OR6J1Q8NGC5 347 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 ZNF564Q8TBZ8 553 aaPredicted RBP13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 FAXDC2Q96IV6 333 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 FAM84AQ96KN4 292 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 KRT12Q99456 494 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 TINF2Q9BSI4 451 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 C16orf70Q9BSU1 422 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 NUP85Q9BW27 656 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 NIF3L1Q9GZT8 377 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 WNT8AQ9H1J5 351 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 CDT1Q9H211 546 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 CNOT8Q9UFF9 292 aaKnown RBP13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 DMGDHQ9UI17 866 aaKnown RBP13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 NUB1Q9Y5A7 615 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 ALG6Q9Y672 507 aa13.54□□□□□ -0.24
AC055717.2-201ENST00000561864 KRIT1O00522 736 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 HEXIM1O94992 359 aaKnown RBP13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 ITGBL1O95965 494 aaPredicted RBP13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 MMP3P08254 477 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 HOXC6P09630 235 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 TMEM191BP0C7N4 346 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 SMPD1P17405 629 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 SGSM1Q2NKQ1 1148 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 SEZ6Q53EL9 994 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 GJC2Q5T442 439 aaPredicted RBP13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 SPOPLQ6IQ16 392 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 MTHFD1LQ6UB35 978 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 HDAC7Q8WUI4 952 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 CAVIN3Q969G5 261 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 ANKRD36BP1Q96IX9 119 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 PTPN18Q99952 460 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 ZSWIM1Q9BR11 485 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 MTMR12Q9C0I1 747 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 ACP6Q9NPH0 428 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 TRPM7Q96QT4 1865 aa13.53□□□□□ -0.24
AC055717.2-201ENST00000561864 GOLGA6L10A0A0M3HER8 536 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 CCDC66A2RUB6 948 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 MANSC4A6NHS7 340 aaPredicted RBP13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 RRN3P2A6NIE6 340 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 H3BRB1 525 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 B4GALT5O43286 388 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 ZMYND10O75800 440 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 ZNF286BP0CG31 522 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 MYBL2P10244 700 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 OAS2P29728 719 aaKnown RBP13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 GNA15P30679 374 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 CTNNA1P35221 906 aaKnown RBP13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 NSFP46459 744 aaKnown RBP13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 AARSP49588 968 aaKnown RBP eCLIP13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 IGBP1P78318 339 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 PPFIA1Q13136 1202 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 TRPC3Q13507 836 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 GRIK4Q16099 956 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 AMHR2Q16671 573 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 DGKDQ16760 1214 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 MORN1Q5T089 497 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 LIN9Q5TKA1 542 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 EEF1DP3Q658K8 133 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 ZNF410Q86VK4 478 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 MCOLN2Q8IZK6 566 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 VCPIP1Q96JH7 1222 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 RNPC3Q96LT9 517 aaKnown RBP13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 TUT1Q9H6E5 874 aaKnown RBP13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 RPF1Q9H9Y2 349 aaKnown RBP13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 IFT122Q9HBG6 1241 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 MED4Q9NPJ6 270 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 ZHX1Q9UKY1 873 aaPredicted RBP13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 AKT3Q9Y243 479 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 ANK1P16157 1881 aa13.52□□□□□ -0.25
AC055717.2-201ENST00000561864 UMODL1Q5DID0 1318 aa13.51□□□□□ -0.25
AC055717.2-201ENST00000561864 TMEM110-MUSTN1A8MSY1 372 aa13.51□□□□□ -0.25
AC055717.2-201ENST00000561864 BHMG1C9JSJ3 638 aaPredicted RBP13.51□□□□□ -0.25
AC055717.2-201ENST00000561864 ATMINO43313 823 aaPredicted RBP13.51□□□□□ -0.25
AC055717.2-201ENST00000561864 RAD51CO43502 376 aa13.51□□□□□ -0.25
AC055717.2-201ENST00000561864 LSM8O95777 96 aaKnown RBP13.51□□□□□ -0.25
AC055717.2-201ENST00000561864 GJB1P08034 283 aa13.51□□□□□ -0.25
AC055717.2-201ENST00000561864 COMTP21964 271 aa13.51□□□□□ -0.25
AC055717.2-201ENST00000561864 RNASE9P60153 205 aaKnown RBP13.51□□□□□ -0.25
AC055717.2-201ENST00000561864 SLC7A5Q01650 507 aa13.51□□□□□ -0.25
AC055717.2-201ENST00000561864 C1QBPQ07021 282 aaKnown RBP13.51□□□□□ -0.25
AC055717.2-201ENST00000561864 MAP2K5Q13163 448 aa13.51□□□□□ -0.25
AC055717.2-201ENST00000561864 CUL1Q13616 776 aa13.51□□□□□ -0.25
AC055717.2-201ENST00000561864 MESDQ14696 234 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms