RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 LIN9Q5TKA1 542 aa11.23□□□□□ -0.61
CLK3-205ENST00000561673 ANKS3Q6ZW76 656 aa11.23□□□□□ -0.61
CLK3-205ENST00000561673 GRASPQ7Z6J2 395 aaPredicted RBP11.23□□□□□ -0.61
CLK3-205ENST00000561673 TMEM130Q8N3G9 435 aa11.23□□□□□ -0.61
CLK3-205ENST00000561673 PRSS33Q8NF86 280 aa11.23□□□□□ -0.61
CLK3-205ENST00000561673 RSAD2Q8WXG1 361 aa11.23□□□□□ -0.61
CLK3-205ENST00000561673 LARP4BQ92615 738 aaKnown RBP11.23□□□□□ -0.61
CLK3-205ENST00000561673 FIZ1Q96SL8 496 aa11.23□□□□□ -0.61
CLK3-205ENST00000561673 ZHX3Q9H4I2 956 aa11.23□□□□□ -0.61
CLK3-205ENST00000561673 PLEKHA5Q9HAU0 1116 aa11.23□□□□□ -0.61
CLK3-205ENST00000561673 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.23□□□□□ -0.61
CLK3-205ENST00000561673 EPS15L1Q9UBC2 864 aa11.23□□□□□ -0.61
CLK3-205ENST00000561673 MTMR6Q9Y217 621 aa11.23□□□□□ -0.61
CLK3-205ENST00000561673 BACE2Q9Y5Z0 518 aa11.23□□□□□ -0.61
CLK3-205ENST00000561673 CDY1Q9Y6F8 540 aa11.23□□□□□ -0.61
CLK3-205ENST00000561673 TTC26A0AVF1 554 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 K7ELQ4 463 aaPredicted RBP11.22□□□□□ -0.61
CLK3-205ENST00000561673 K7ENM7 598 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 HNRNPDLO14979 420 aaKnown RBP11.22□□□□□ -0.61
CLK3-205ENST00000561673 CCL16O15467 120 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 FAM189A1O60320 539 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 TBC1D4O60343 1298 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 PIGRP01833 764 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 CLTAP09496 248 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 HNRNPA1P09651 372 aaKnown RBP eCLIP11.22□□□□□ -0.61
CLK3-205ENST00000561673 LAMP2P13473 410 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 SCP2P22307 547 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 NMT1P30419 496 aaKnown RBP11.22□□□□□ -0.61
CLK3-205ENST00000561673 HOXA9P31269 272 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 TNFSF9P41273 254 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 LIG4P49917 911 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 NTHL1P78549 312 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 GTF2BQ00403 316 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 SPAG1Q07617 926 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 UVSSAQ2YD98 709 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 PPM1LQ5SGD2 360 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 VARS2Q5ST30 1063 aaKnown RBP11.22□□□□□ -0.61
CLK3-205ENST00000561673 ZBTB41Q5SVQ8 909 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 MUC6Q6W4X9 2439 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 GET4Q7L5D6 327 aaPredicted RBP11.22□□□□□ -0.61
CLK3-205ENST00000561673 SLC7A14Q8TBB6 771 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 IGSF9Q9P2J2 1179 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 TUBGCP4Q9UGJ1 667 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 DUSP12Q9UNI6 340 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 NUB1Q9Y5A7 615 aa11.22□□□□□ -0.61
CLK3-205ENST00000561673 C2orf16Q68DN1 1984 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 A0A0B4J269 797 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 LACTBL1A8MY62 500 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 SYN3O14994 580 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 STX6O43752 255 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 NARSO43776 548 aaKnown RBP11.21□□□□□ -0.61
CLK3-205ENST00000561673 XYLBO75191 536 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 TBCAO75347 108 aaKnown RBP11.21□□□□□ -0.61
CLK3-205ENST00000561673 FSHRP23945 695 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 TCF15Q12870 199 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 MRPL58Q14197 206 aaKnown RBP11.21□□□□□ -0.61
CLK3-205ENST00000561673 SLC39A14Q15043 492 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 ZBTB6Q15916 424 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 ENOX2Q16206 610 aaKnown RBP11.21□□□□□ -0.61
CLK3-205ENST00000561673 KYAT1Q16773 422 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 ZC2HC1CQ53FD0 456 aaPredicted RBP11.21□□□□□ -0.61
CLK3-205ENST00000561673 RRAGBQ5VZM2 374 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 SLC8B1Q6J4K2 584 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 SLC39A4Q6P5W5 647 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 DYMQ7RTS9 669 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 SLC44A3Q8N4M1 653 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
CLK3-205ENST00000561673 ZNF461Q8TAF7 563 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 KIF12Q96FN5 646 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 SUSD3Q96L08 255 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 USP28Q96RU2 1077 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 PRRX2Q99811 253 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 ZSCAN16Q9H4T2 348 aaPredicted RBP11.21□□□□□ -0.61
CLK3-205ENST00000561673 CCDC39Q9UFE4 941 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 POLIQ9UNA4 740 aa11.21□□□□□ -0.61
CLK3-205ENST00000561673 VPS13AQ96RL7 3174 aa11.21□□□□□ -0.62
CLK3-205ENST00000561673 MYO10Q9HD67 2058 aa11.21□□□□□ -0.62
CLK3-205ENST00000561673 DENND4AQ7Z401 1863 aa11.21□□□□□ -0.62
CLK3-205ENST00000561673 ZNF318Q5VUA4 2279 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 WDR27A2RRH5 827 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 MYMKA6NI61 221 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 ANKRD63C9JTQ0 380 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 ANHXE9PGG2 379 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 H7C4K7 107 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 STK25O00506 426 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 OGTO15294 1046 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 ABLIM3O94929 683 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 ADRB2P07550 413 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 POU2F2P09086 479 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 MCM4P33991 863 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 ARPP19P56211 112 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 ROR1Q01973 937 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 PPP2R3AQ06190 1150 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 ASTLQ6HA08 431 aaPredicted RBP11.2□□□□□ -0.62
CLK3-205ENST00000561673 RTL10Q7L3V2 364 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 ZNF720Q7Z2F6 126 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 ALYREFQ86V81 257 aaKnown RBP11.2□□□□□ -0.62
CLK3-205ENST00000561673 MAP4K3Q8IVH8 894 aa11.2□□□□□ -0.62
CLK3-205ENST00000561673 ST13P5Q8NFI4 369 aaPredicted RBP11.2□□□□□ -0.62
CLK3-205ENST00000561673 ITFG1Q8TB96 612 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms