RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 ITGA11Q9UKX5 1188 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 AGAP1Q9UPQ3 857 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 FAM50BQ9Y247 325 aa11.58□□□□□ -0.56
TPM1-229ENST00000561242 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.57□□□□□ -0.56
TPM1-229ENST00000561242 TTC26A0AVF1 554 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 SMTNL1A8MU46 457 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 INPPL1O15357 1258 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 N4BP1O75113 896 aaKnown RBP11.57□□□□□ -0.56
TPM1-229ENST00000561242 ADH1AP07327 375 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 PRKCSHP14314 528 aaPredicted RBP11.57□□□□□ -0.56
TPM1-229ENST00000561242 TAF6P49848 677 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 CLCNKBP51801 687 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 STX17P56962 302 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 TNNC1P63316 161 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 CYP24A1Q07973 514 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 EHHADHQ08426 723 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 BFSP1Q12934 665 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 MORC3Q14149 939 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 CCDC85BQ15834 202 aaPredicted RBP11.57□□□□□ -0.56
TPM1-229ENST00000561242 COBLL1Q53SF7 1204 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 DCAF17Q5H9S7 520 aaPredicted RBP11.57□□□□□ -0.56
TPM1-229ENST00000561242 FUT10Q6P4F1 479 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 LRRC55Q6ZSA7 311 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 ANKS3Q6ZW76 656 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 ADSSL1Q8N142 457 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 HASPINQ8TF76 798 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 CEP63Q96MT8 703 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 MMS19Q96T76 1030 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 TTPALQ9BTX7 342 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 MKNK1Q9BUB5 465 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 MMRN2Q9H8L6 949 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 RNF19AQ9NV58 838 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 MIOSQ9NXC5 875 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 DNAJB4Q9UDY4 337 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 RWDD2AQ9UIY3 292 aa11.57□□□□□ -0.56
TPM1-229ENST00000561242 TISP43B9A030 160 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 GOLGA6L19H0YKK7 550 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 RFXAPO00287 272 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 MAPK13O15264 365 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 SLC16A3O15427 465 aaKnown RBP11.56□□□□□ -0.56
TPM1-229ENST00000561242 TGFB1I1O43294 461 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 SOD2P04179 222 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 ITGB1P05556 798 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 ADSSP30520 456 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 PBX3P40426 434 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 MTIF2P46199 727 aaKnown RBP11.56□□□□□ -0.56
TPM1-229ENST00000561242 PSMD6Q15008 389 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 NFIL3Q16649 462 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 SPATA1Q5VX52 437 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 CENPPQ6IPU0 288 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.56□□□□□ -0.56
TPM1-229ENST00000561242 FILIP1Q7Z7B0 1213 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 RBM23Q86U06 439 aaKnown RBP11.56□□□□□ -0.56
TPM1-229ENST00000561242 CBWD2Q8IUF1 395 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 CRIPAKQ8N1N5 446 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 GLIS3Q8NEA6 775 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 SPPL3Q8TCT6 385 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 TMC2Q8TDI7 906 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 RIN2Q8WYP3 895 aaPredicted RBP11.56□□□□□ -0.56
TPM1-229ENST00000561242 PPP1R10Q96QC0 940 aaKnown RBP11.56□□□□□ -0.56
TPM1-229ENST00000561242 CGRRF1Q99675 332 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 SRRTQ9BXP5 876 aaKnown RBP11.56□□□□□ -0.56
TPM1-229ENST00000561242 FGFBP2Q9BYJ0 223 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 SNX25Q9H3E2 840 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 PDE11AQ9HCR9 933 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 MTMR10Q9NXD2 777 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 HTTP42858 3142 aa11.56□□□□□ -0.56
TPM1-229ENST00000561242 PTGESO14684 152 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 IKBKBO14920 756 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 SYN3O14994 580 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 GRM6O15303 877 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 ITGB3P05106 788 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 EDN1P05305 212 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 NFICP08651 508 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 ERCC5P28715 1186 aaPredicted RBP11.55□□□□□ -0.56
TPM1-229ENST00000561242 ATICP31939 592 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 PIK3CAP42336 1068 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 NDUFV1P49821 464 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 ARPP19P56211 112 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 YWHAHQ04917 246 aaPredicted RBP11.55□□□□□ -0.56
TPM1-229ENST00000561242 DSC1Q08554 894 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 TAF12Q16514 161 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 UPP1Q16831 310 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 SGSM1Q2NKQ1 1148 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 KLHL40Q2TBA0 621 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 XKR4Q5GH76 650 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 ANKRD40Q6AI12 368 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 ZNF280DQ6N043 979 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 SLC39A4Q6P5W5 647 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 ALKAL1Q6UXT8 129 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 SPATA20Q8TB22 786 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 RABGGTAQ92696 567 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 C18orf25Q96B23 403 aaPredicted RBP11.55□□□□□ -0.56
TPM1-229ENST00000561242 HERC2P3Q9BVR0 1158 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 TTYH1Q9H313 450 aaPredicted RBP11.55□□□□□ -0.56
TPM1-229ENST00000561242 KCTD10Q9H3F6 313 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 INTS13Q9NVM9 706 aa11.55□□□□□ -0.56
TPM1-229ENST00000561242 LOXHD1Q8IVV2 1947 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 TRIP12Q14669 1992 aaPredicted RBP11.54□□□□□ -0.56
TPM1-229ENST00000561242 KPNA7A9QM74 516 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms