RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 EFCAB13Q8IY85 973 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 MLKLQ8NB16 471 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 GDPD5Q8WTR4 605 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 CACTINQ8WUQ7 758 aaKnown RBP10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 BCL7CQ8WUZ0 217 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 MYLIPQ8WY64 445 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 KIF12Q96FN5 646 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 MKNK1Q9BUB5 465 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 VN1R3Q9BXE9 311 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 PDE11AQ9HCR9 933 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 TLR9Q9NR96 1032 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 ADAM28Q9UKQ2 775 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 STXBP5LQ9Y2K9 1186 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 BICDL2A1A5D9 508 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 CASTOR2A6NHX0 329 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 BIN1O00499 593 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 PIRO00625 290 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 IKBKBO14920 756 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 EXOC3O60645 756 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 SOD2P04179 222 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 NFICP08651 508 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 CTSAP10619 480 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 NR2F2P24468 414 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 AARSP49588 968 aaKnown RBP eCLIP10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 CASP4P49662 377 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 PMS1P54277 932 aaKnown RBP10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 ERVFC1P60507 584 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 FKBP3Q00688 224 aaKnown RBP10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 ADAM9Q13443 819 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 KLHL40Q2TBA0 621 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 CCDC183Q5T5S1 534 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 ISM2Q6H9L7 571 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 TTI2Q6NXR4 508 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 WDR49Q8IV35 697 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 BEST2Q8NFU1 509 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 CXorf38Q8TB03 319 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 TMC2Q8TDI7 906 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 PARD3BQ8TEW8 1205 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 C18orf25Q96B23 403 aaPredicted RBP10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 FAM212AQ96EL1 285 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 BORCS6Q96GS4 357 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 TSG101Q99816 390 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 GZF1Q9H116 711 aaPredicted RBP10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 ZBP1Q9H171 429 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 GOLGA2P5Q9HBQ8 144 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 NGRNQ9NPE2 291 aaKnown RBP10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 CHST7Q9NS84 486 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 INTS13Q9NVM9 706 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 FRMD4BQ9Y2L6 1034 aa10.43□□□□□ -0.74
RABGGTA-221ENST00000561055 F8W810 466 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 PODXLO00592 558 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 CETN3O15182 167 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 TRAPPC3O43617 180 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 LILRB3O75022 631 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 TADA2AO75478 443 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 AKAP3O75969 853 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 B3GAT3O94766 335 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 KIF4AO95239 1232 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 C1RP00736 705 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 AP3M2P53677 418 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 NLRP12P59046 1061 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 SPAG1Q07617 926 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 BMS1Q14692 1282 aaKnown RBP10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 COL19A1Q14993 1142 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 DUOXA2Q1HG44 320 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 TIGD5Q53EQ6 642 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 KIAA0319Q5VV43 1072 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 C9orf57Q5W0N0 161 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 FUT10Q6P4F1 479 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 FILIP1Q7Z7B0 1213 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 VPS52Q8N1B4 723 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 MRPL43Q8N983 215 aaKnown RBP10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 RDH13Q8NBN7 331 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 C3orf58Q8NDZ4 430 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 PLEKHO2Q8TD55 490 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 CEP63Q96MT8 703 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 CGRRF1Q99675 332 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 DUSP9Q99956 384 aaKnown RBP10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 HERC2P3Q9BVR0 1158 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 GPR62Q9BZJ7 368 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 DPP3Q9NY33 737 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 TMEM63CQ9P1W3 806 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 CACNG4Q9UBN1 327 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 TUBGCP4Q9UGJ1 667 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 ITGA11Q9UKX5 1188 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 SSX2IPQ9Y2D8 614 aa10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 PRG3Q9Y2Y8 225 aaPredicted RBP10.42□□□□□ -0.74
RABGGTA-221ENST00000561055 PTPRDP23468 1912 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 SF3B1O75533 1304 aaKnown RBP eCLIP10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 PTPRJQ12913 1337 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 TRIM49BA6NDI0 452 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 M0QZQ0 153 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 DLL1O00548 723 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 FOSL2P15408 326 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 FGFR3P22607 806 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 IGFBP6P24592 240 aaPredicted RBP10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 ERCC5P28715 1186 aaPredicted RBP10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 IRS1P35568 1242 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 PSMC2P35998 433 aaKnown RBP10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 LILRA4P59901 499 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms