RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 BACE1P56817 501 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 IFI35P80217 286 aaPredicted RBP14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 DR1Q01658 176 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 CBWD6Q4V339 395 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 CBWD3Q5JTY5 395 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 CBWD5Q5RIA9 395 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 FITM2Q8N6M3 262 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 RNF25Q96BH1 459 aaPredicted RBP14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 RUNDC3BQ96NL0 473 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 MTFR1LQ9H019 292 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 FGFR1OP2Q9NVK5 253 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 MTRF1LQ9UGC7 380 aaKnown RBP14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 SCOCQ9UIL1 159 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 DAAM1Q9Y4D1 1078 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 PHIPQ8WWQ0 1821 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 TLDC2A0PJX2 215 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 TCP11X1B4DZS4 312 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 EXOC3O60645 756 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 ATP9AO75110 1047 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 POTEJP0CG39 1038 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 ITGA4P13612 1032 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 YWHABP31946 246 aaKnown RBP14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 STAT1P42224 750 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 JAK3P52333 1124 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 ARHGEF16Q5VV41 709 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 NSMFQ6X4W1 530 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 TRIM74Q86UV6 250 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 TRIM73Q86UV7 250 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 C4orf19Q8IY42 314 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 ARHGAP18Q8N392 663 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 RBBP8NLQ8NC74 664 aaPredicted RBP14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 TMEM174Q8WUU8 243 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 HES6Q96HZ4 224 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 STK33Q9BYT3 514 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 INTS2Q9H0H0 1204 aaKnown RBP14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 TMEM206Q9H813 350 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 RNF146Q9NTX7 359 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 PPP1R1BQ9UD71 204 aaPredicted RBP14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 BCS1LQ9Y276 419 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 LRCH1Q9Y2L9 728 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 RIPK3Q9Y572 518 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 RASGRF2O14827 1237 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 GFPT2O94808 682 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 CCNE2O96020 404 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 PTPRAP18433 802 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 SOX5P35711 763 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 MYL7Q01449 175 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 BFSP1Q12934 665 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 BAATQ14032 418 aaPredicted RBP14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 ZRSR2Q15696 482 aaKnown RBP14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 SPDYAQ5MJ70 313 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 OR52E8Q6IFG1 317 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 XRRA1Q6P2D8 792 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 ALKBH5Q6P6C2 394 aaKnown RBP14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 DAAM2Q86T65 1068 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 VPS36Q86VN1 386 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 C12orf56Q8IXR9 622 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 ZNF280CQ8ND82 737 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 REPS2Q8NFH8 660 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 MAIP1Q8WWC4 291 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 CKAP2Q8WWK9 683 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 FAM136AQ96C01 138 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 FGD4Q96M96 766 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 ACCSQ96QU6 501 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 RPS6KC1Q96S38 1066 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 CCDC28BQ9BUN5 200 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 TIPINQ9BVW5 301 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 CELF4Q9BZC1 486 aaKnown RBP14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 AS3MTQ9HBK9 375 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 ETNK1Q9HBU6 452 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 DMAP1Q9NPF5 467 aaPredicted RBP14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 PNMA3Q9UL41 463 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 RPS6KL1Q9Y6S9 549 aa14.87□□□□□ -0.03
RABGGTA-220ENST00000560998 TMEM150BA6NC51 233 aa14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 WDR64B1ANS9 1081 aa14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 DDX3XO00571 662 aaKnown RBP eCLIP14.86□□□□□ -0.032e-6■□□□□ 11
RABGGTA-220ENST00000560998 CREB3O43889 395 aa14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 PYGLP06737 847 aa14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 SFNP31947 248 aa14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 TUBP50607 506 aa14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 PSMC5P62195 406 aa14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 KRT76Q01546 638 aa14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 SLC29A2Q14542 456 aa14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 OLIG1Q8TAK6 271 aa14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 TRIM51Q9BSJ1 452 aa14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 ST6GALNAC4Q9H4F1 302 aa14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 PICK1Q9NRD5 415 aa14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 NKX1-2Q9UD57 310 aaPredicted RBP14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 DNAJC12Q9UKB3 198 aa14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 WDR81Q562E7 1941 aa14.86□□□□□ -0.03
RABGGTA-220ENST00000560998 TESPA1A2RU30 521 aaPredicted RBP14.85□□□□□ -0.03
RABGGTA-220ENST00000560998 HSPA6P17066 643 aa14.85□□□□□ -0.03
RABGGTA-220ENST00000560998 AUHQ13825 339 aaKnown RBP14.85□□□□□ -0.03
RABGGTA-220ENST00000560998 DRAP1Q14919 205 aaPredicted RBP14.85□□□□□ -0.03
RABGGTA-220ENST00000560998 NT5DC3Q86UY8 548 aa14.85□□□□□ -0.03
RABGGTA-220ENST00000560998 UTP4Q969X6 686 aaKnown RBP14.85□□□□□ -0.03
RABGGTA-220ENST00000560998 C12orf42Q96LP6 360 aa14.85□□□□□ -0.03
RABGGTA-220ENST00000560998 WRNIP1Q96S55 665 aa14.85□□□□□ -0.03
RABGGTA-220ENST00000560998 SH2D3AQ9BRG2 576 aa14.85□□□□□ -0.03
RABGGTA-220ENST00000560998 GPR88Q9GZN0 384 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms