RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 MMEP08473 750 aa13.85□□□□□ -0.19
SNX1-211ENST00000560829 TMEM191BP0C7N4 346 aa13.85□□□□□ -0.19
SNX1-211ENST00000560829 KRT5P13647 590 aa13.85□□□□□ -0.19
SNX1-211ENST00000560829 OSTNP61366 133 aa13.85□□□□□ -0.19
SNX1-211ENST00000560829 RUFY4Q6ZNE9 571 aa13.85□□□□□ -0.19
SNX1-211ENST00000560829 ZNF572Q7Z3I7 529 aaPredicted RBP13.85□□□□□ -0.19
SNX1-211ENST00000560829 CREG2Q8IUH2 290 aa13.85□□□□□ -0.19
SNX1-211ENST00000560829 RHOT2Q8IXI1 618 aa13.85□□□□□ -0.19
SNX1-211ENST00000560829 TMEM192Q8IY95 271 aa13.85□□□□□ -0.19
SNX1-211ENST00000560829 TAF4BQ92750 862 aa13.85□□□□□ -0.19
SNX1-211ENST00000560829 FAM212AQ96EL1 285 aa13.85□□□□□ -0.19
SNX1-211ENST00000560829 OSBPL9Q96SU4 736 aa13.85□□□□□ -0.19
SNX1-211ENST00000560829 ADPGKQ9BRR6 497 aa13.85□□□□□ -0.19
SNX1-211ENST00000560829 FAM49AQ9H0Q0 323 aaPredicted RBP13.85□□□□□ -0.19
SNX1-211ENST00000560829 XYLT2Q9H1B5 865 aa13.85□□□□□ -0.19
SNX1-211ENST00000560829 ACP6Q9NPH0 428 aa13.85□□□□□ -0.19
SNX1-211ENST00000560829 SEPT11Q9NVA2 429 aaKnown RBP13.85□□□□□ -0.19
SNX1-211ENST00000560829 C17orf102A2RUQ5 167 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 TMCO5BA8MYB1 307 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 SEPT4O43236 478 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 FTLP02792 175 aaPredicted RBP13.84□□□□□ -0.19
SNX1-211ENST00000560829 GNAT1P11488 350 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 DARSP14868 501 aaKnown RBP13.84□□□□□ -0.19
SNX1-211ENST00000560829 HOXA11P31270 313 aaPredicted RBP13.84□□□□□ -0.19
SNX1-211ENST00000560829 GRM5P41594 1212 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 NOP2P46087 812 aaKnown RBP13.84□□□□□ -0.19
SNX1-211ENST00000560829 MYL6P60660 151 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 TFAMQ00059 246 aaKnown RBP13.84□□□□□ -0.19
SNX1-211ENST00000560829 PRKCZQ05513 592 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 DCAF4L1Q3SXM0 396 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 TAF3Q5VWG9 929 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 SYCE1Q8N0S2 351 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 NME8Q8N427 588 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 GPR161Q8N6U8 529 aaKnown RBP13.84□□□□□ -0.19
SNX1-211ENST00000560829 CAPNS2Q96L46 248 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 NIF3L1Q9GZT8 377 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 THAP2Q9H0W7 228 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 UMODL1Q5DID0 1318 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 MYADML2A6NDP7 307 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 LACTBL1A8MY62 500 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 TREHO43280 583 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 AOC2O75106 756 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 EIF4BP23588 611 aaKnown RBP13.84□□□□□ -0.19
SNX1-211ENST00000560829 ZNF132P52740 706 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 ITIH3Q06033 890 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 TRPC3Q13507 836 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 DEFB115Q30KQ5 88 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 SLC10A6Q3KNW5 377 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 SCARA3Q6AZY7 606 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 APBB1IPQ7Z5R6 666 aaPredicted RBP13.84□□□□□ -0.19
SNX1-211ENST00000560829 NT5DC4Q86YG4 428 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 CD302Q8IX05 232 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 SLC35G2Q8TBE7 412 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 ARHGEF26Q96DR7 871 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 MMS19Q96T76 1030 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 MTG1Q9BT17 334 aaPredicted RBP13.84□□□□□ -0.19
SNX1-211ENST00000560829 RNF14Q9UBS8 474 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 C2CD2Q9Y426 696 aa13.84□□□□□ -0.19
SNX1-211ENST00000560829 DOCK3Q8IZD9 2030 aa13.83□□□□□ -0.19
SNX1-211ENST00000560829 MROH7Q68CQ1 1323 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 CES2O00748 559 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 NCK2O43639 380 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 MTA2O94776 668 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 FTCDO95954 541 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 C6orf222P0C671 652 aaPredicted RBP13.83□□□□□ -0.2
SNX1-211ENST00000560829 H2AFXP16104 143 aaPredicted RBP13.83□□□□□ -0.2
SNX1-211ENST00000560829 ABCB4P21439 1286 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 AXLP30530 894 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 GPC5P78333 572 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 SP3Q02447 781 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 CLEC16AQ2KHT3 1053 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 TEX35Q5T0J7 233 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 SLC27A1Q6PCB7 646 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 C7orf31Q8N865 590 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 CXorf38Q8TB03 319 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 COG1Q8WTW3 980 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 DNAJB3Q8WWF6 145 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 OSMRQ99650 979 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 VRTNQ9H8Y1 702 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 CDHR5Q9HBB8 845 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 ABCB6Q9NP58 842 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 CREBZFQ9NS37 354 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 SIX4Q9UIU6 781 aa13.83□□□□□ -0.2
SNX1-211ENST00000560829 ZNF185O15231 689 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 NFICP08651 508 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 UNGP13051 313 aaPredicted RBP13.82□□□□□ -0.2
SNX1-211ENST00000560829 CAP1Q01518 475 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 TMEM62Q0P6H9 643 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 ZNF699Q32M78 642 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 GNASQ5JWF2 1037 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 ACAD10Q6JQN1 1059 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 TAF2Q6P1X5 1199 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 CATSPER4Q7RTX7 472 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 MTERF4Q7Z6M4 381 aaKnown RBP13.82□□□□□ -0.2
SNX1-211ENST00000560829 C1orf127Q8N9H9 656 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 RBBP8NLQ8NC74 664 aaPredicted RBP13.82□□□□□ -0.2
SNX1-211ENST00000560829 UBE2Q2Q8WVN8 375 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 ACAP3Q96P50 834 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 PLEKHA5Q9HAU0 1116 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 SPC25Q9HBM1 224 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms