RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 MAGEL2Q9UJ55 1249 aa5.2□□□□□ -1.58
TMOD3-207ENST00000560549 IBTKQ9P2D0 1353 aaPredicted RBP5.19□□□□□ -1.58
TMOD3-207ENST00000560549 PXDNLA1KZ92 1463 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 GLI3P10071 1580 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 ABCC6O95255 1503 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 A0A0G2JNJ9 132 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 FRAT2O75474 233 aaPredicted RBP5.19□□□□□ -1.58
TMOD3-207ENST00000560549 MYL6BP14649 208 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 SLC9A1P19634 815 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 ERVK-21P61565 698 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 HLTFQ14527 1009 aaKnown RBP eCLIP5.19□□□□□ -1.58
TMOD3-207ENST00000560549 AGBL4Q5VU57 503 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 GRAMD4Q6IC98 578 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 OTOP2Q7RTS6 562 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 EFHBQ8N7U6 833 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 KIAA1958Q8N8K9 716 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 CHST13Q8NET6 341 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 SUCLG2Q96I99 432 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 SCYL1Q96KG9 808 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 ELF4Q99607 663 aaPredicted RBP5.19□□□□□ -1.58
TMOD3-207ENST00000560549 KLC2Q9H0B6 622 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 ZNF700Q9H0M5 742 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 UPF2Q9HAU5 1272 aaKnown RBP5.19□□□□□ -1.58
TMOD3-207ENST00000560549 IL1RAPL2Q9NP60 686 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 DDX21Q9NR30 783 aaKnown RBP eCLIP5.19□□□□□ -1.58
TMOD3-207ENST00000560549 HYPKQ9NX55 129 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 Q9UFV3 132 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 STAP2Q9UGK3 403 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 PNMA2Q9UL42 364 aa5.19□□□□□ -1.58
TMOD3-207ENST00000560549 COL5A2P05997 1499 aaPredicted RBP5.19□□□□□ -1.58
TMOD3-207ENST00000560549 WDR17Q8IZU2 1322 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 LCHNA4D1U4 455 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 K7ESF4 209 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 GABRDO14764 452 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 SURF6O75683 361 aaKnown RBP5.18□□□□□ -1.58
TMOD3-207ENST00000560549 LDHAP00338 332 aaKnown RBP5.18□□□□□ -1.58
TMOD3-207ENST00000560549 DDIT3P35638 169 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 DEKP35659 375 aaKnown RBP5.18□□□□□ -1.58
TMOD3-207ENST00000560549 FNTBP49356 437 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 MRE11P49959 708 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 ANTXR2P58335 489 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 SMAD3P84022 425 aaKnown RBP5.18□□□□□ -1.58
TMOD3-207ENST00000560549 BECN1Q14457 450 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 DHX8Q14562 1220 aaKnown RBP5.18□□□□□ -1.58
TMOD3-207ENST00000560549 ARHGAP44Q17R89 818 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 ATP13A4Q4VNC1 1196 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 EPHA10Q5JZY3 1008 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 TOM1L2Q6ZVM7 507 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 COPS6Q7L5N1 327 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 TAX1BP1Q86VP1 789 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 PALM2Q8IXS6 379 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 FUKQ8N0W3 1084 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 CNTD1Q8N815 330 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 SNX21Q969T3 373 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 FOXB1Q99853 325 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 KRTAP9-8Q9BYQ0 159 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 LRRCC1Q9C099 1032 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 ZMAT4Q9H898 229 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 CHST12Q9NRB3 414 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 FBXO10Q9UK96 956 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 OAZ3Q9UMX2 235 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 PA2G4Q9UQ80 394 aaKnown RBP5.18□□□□□ -1.58
TMOD3-207ENST00000560549 ZKSCAN5Q9Y2L8 839 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 SPO11Q9Y5K1 396 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 VIRMAQ69YN4 1812 aaKnown RBP5.18□□□□□ -1.58
TMOD3-207ENST00000560549 BRWD3Q6RI45 1802 aa5.18□□□□□ -1.58
TMOD3-207ENST00000560549 UTYO14607 1347 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 SPATA31A1Q5TZJ5 1347 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 SPATA31A5Q5VU36 1347 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 SPATA31A7Q8IWB4 1347 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 MRC1P22897 1456 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 CCDC189A1A4V9 331 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 FZD9O00144 591 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 IFRD1O00458 451 aaPredicted RBP5.17□□□□□ -1.58
TMOD3-207ENST00000560549 ARHGAP6O43182 974 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 ZNF623O75123 536 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 MAFO75444 373 aaPredicted RBP5.17□□□□□ -1.58
TMOD3-207ENST00000560549 KRT18P05783 430 aaKnown RBP5.17□□□□□ -1.58
TMOD3-207ENST00000560549 SNRPA1P09661 255 aaKnown RBP5.17□□□□□ -1.58
TMOD3-207ENST00000560549 CPEP16870 476 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 MX1P20591 662 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 KPNA1P52294 538 aaPredicted RBP5.17□□□□□ -1.58
TMOD3-207ENST00000560549 ZXDAP98168 799 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 SLC6A3Q01959 620 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 HGFACQ04756 655 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 MCL1Q07820 350 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 OS9Q13438 667 aaPredicted RBP5.17□□□□□ -1.58
TMOD3-207ENST00000560549 MTX1Q13505 466 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 NFYCQ13952 458 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 MYBPC3Q14896 1274 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 ACAP1Q15027 740 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 PPP2R5AQ15172 486 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 LRRC41Q15345 812 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 INAVAQ3KP66 663 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 LINS1Q8NG48 757 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 MYD88Q99836 296 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 IL25Q9H293 177 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 TRHDEQ9UKU6 1024 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 ZFR2Q9UPR6 939 aaKnown RBP5.17□□□□□ -1.58
TMOD3-207ENST00000560549 NR2E1Q9Y466 385 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms