RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 SMIM28A0A1B0GU29 152 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 E9PMD0 336 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 STK25O00506 426 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 SYN3O14994 580 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 CCL16O15467 120 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 HIP1RO75146 1068 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 KCNE1P15382 129 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 PROZP22891 400 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 TKTP29401 623 aaKnown RBP14.84□□□□□ -0.03
SMAD3-214ENST00000560402 OR1D2P34982 312 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 TOB1P50616 345 aaPredicted RBP14.84□□□□□ -0.03
SMAD3-214ENST00000560402 UBE2HP62256 183 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 MAPK7Q13164 816 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 HYIQ5T013 277 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 MPZL3Q6UWV2 235 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 ALKAL1Q6UXT8 129 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 FRMD5Q7Z6J6 570 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 ZNF396Q96N95 335 aaPredicted RBP14.84□□□□□ -0.03
SMAD3-214ENST00000560402 SEMA4AQ9H3S1 761 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 KCND2Q9NZV8 630 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 CNTN3Q9P232 1028 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 POLIQ9UNA4 740 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 CDY1Q9Y6F8 540 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 PATJQ8NI35 1801 aa14.84□□□□□ -0.03
SMAD3-214ENST00000560402 RIF1Q5UIP0 2472 aaKnown RBP14.84□□□□□ -0.03
SMAD3-214ENST00000560402 GOLGA6L4A6NEF3 574 aa14.83□□□□□ -0.04
SMAD3-214ENST00000560402 PODXLO00592 558 aa14.83□□□□□ -0.04
SMAD3-214ENST00000560402 ADAM12O43184 909 aa14.83□□□□□ -0.04
SMAD3-214ENST00000560402 ATP2C1P98194 919 aaPredicted RBP14.83□□□□□ -0.04
SMAD3-214ENST00000560402 PFKPQ01813 784 aa14.83□□□□□ -0.04
SMAD3-214ENST00000560402 PABPC1LQ4VXU2 614 aaKnown RBP14.83□□□□□ -0.04
SMAD3-214ENST00000560402 SLC8B1Q6J4K2 584 aa14.83□□□□□ -0.04
SMAD3-214ENST00000560402 RINT1Q6NUQ1 792 aa14.83□□□□□ -0.04
SMAD3-214ENST00000560402 C1orf186Q6ZWK4 172 aa14.83□□□□□ -0.04
SMAD3-214ENST00000560402 TAS1R3Q7RTX0 852 aa14.83□□□□□ -0.04
SMAD3-214ENST00000560402 CEP120Q8N960 986 aa14.83□□□□□ -0.04
SMAD3-214ENST00000560402 SPIRE2Q8WWL2 714 aa14.83□□□□□ -0.04
SMAD3-214ENST00000560402 FGF13Q92913 245 aa14.83□□□□□ -0.04
SMAD3-214ENST00000560402 ACAP3Q96P50 834 aa14.83□□□□□ -0.04
SMAD3-214ENST00000560402 RUSC1Q9BVN2 902 aa14.83□□□□□ -0.04
SMAD3-214ENST00000560402 GOLGA2P5Q9HBQ8 144 aa14.83□□□□□ -0.04
SMAD3-214ENST00000560402 AVENQ9NQS1 362 aaPredicted RBP14.83□□□□□ -0.04
SMAD3-214ENST00000560402 PP2D1A8MPX8 630 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 H0YCG3 227 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 H7C4K7 107 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 ABLIM1O14639 778 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 SLC26A4O43511 780 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 RPL9P32969 192 aaKnown RBP14.82□□□□□ -0.04
SMAD3-214ENST00000560402 SMTNP53814 917 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 STARD6P59095 220 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 NTHL1P78549 312 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 PRKCQQ04759 706 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 STRN3Q13033 797 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 NOLC1Q14978 699 aaKnown RBP eCLIP14.82□□□□□ -0.04
SMAD3-214ENST00000560402 FOXD4L6Q3SYB3 417 aaPredicted RBP14.82□□□□□ -0.04
SMAD3-214ENST00000560402 CD300LGQ6UXG3 332 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 FOXD4L3Q6VB84 417 aaPredicted RBP14.82□□□□□ -0.04
SMAD3-214ENST00000560402 NPAS3Q8IXF0 933 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 C3orf58Q8NDZ4 430 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 PJA1Q8NG27 643 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 FGF14Q92915 247 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 NTPCRQ9BSD7 190 aaKnown RBP14.82□□□□□ -0.04
SMAD3-214ENST00000560402 TARS2Q9BW92 718 aaKnown RBP14.82□□□□□ -0.04
SMAD3-214ENST00000560402 SIT1Q9Y3P8 196 aa14.82□□□□□ -0.04
SMAD3-214ENST00000560402 PTPRZ1P23471 2315 aaPredicted RBP14.82□□□□□ -0.04
SMAD3-214ENST00000560402 ARHGEF37A1IGU5 675 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 TOM1L1O75674 476 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 LETM1O95202 739 aaPredicted RBP14.81□□□□□ -0.04
SMAD3-214ENST00000560402 LRG1P02750 347 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 PLS3P13797 630 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 SCP2P22307 547 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 ELF1P32519 619 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 MAGEA9P43362 315 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 BRCC3P46736 316 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 ROR1Q01973 937 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 SOX4Q06945 474 aaPredicted RBP14.81□□□□□ -0.04
SMAD3-214ENST00000560402 VARS2Q5ST30 1063 aaKnown RBP14.81□□□□□ -0.04
SMAD3-214ENST00000560402 ARL6IP4Q66PJ3 421 aaKnown RBP14.81□□□□□ -0.04
SMAD3-214ENST00000560402 CAVIN1Q6NZI2 390 aaKnown RBP14.81□□□□□ -0.04
SMAD3-214ENST00000560402 ZC3H14Q6PJT7 736 aaKnown RBP14.81□□□□□ -0.04
SMAD3-214ENST00000560402 PARM1Q6UWI2 310 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 RSPO2Q6UXX9 243 aaPredicted RBP14.81□□□□□ -0.04
SMAD3-214ENST00000560402 ZPBP2Q6X784 338 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 ZNF461Q8TAF7 563 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 ITFG1Q8TB96 612 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 KCNN1Q92952 543 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 CDK5RAP3Q96JB5 506 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 TCHPQ9BT92 498 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 MMTAG2Q9BU76 263 aaKnown RBP14.81□□□□□ -0.04
SMAD3-214ENST00000560402 POLD4Q9HCU8 107 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 GDE1Q9NZC3 331 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 DLGAP2Q9P1A6 1054 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 DNMT3BQ9UBC3 853 aaKnown RBP14.81□□□□□ -0.04
SMAD3-214ENST00000560402 NUB1Q9Y5A7 615 aa14.81□□□□□ -0.04
SMAD3-214ENST00000560402 GVINP1Q7Z2Y8 2422 aa14.8□□□□□ -0.04
SMAD3-214ENST00000560402 SLC16A4O15374 487 aa14.8□□□□□ -0.04
SMAD3-214ENST00000560402 OSTNP61366 133 aa14.8□□□□□ -0.04
SMAD3-214ENST00000560402 DNM1Q05193 864 aaKnown RBP14.8□□□□□ -0.04
SMAD3-214ENST00000560402 MLF2Q15773 248 aaPredicted RBP14.8□□□□□ -0.04
SMAD3-214ENST00000560402 IL17AQ16552 155 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms