RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 ROR1Q01973 937 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 FAM187BQ17R55 369 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 CDCA2Q69YH5 1023 aaPredicted RBP18.32■□□□□ 0.52
HERC1-207ENST00000560316 ANKS3Q6ZW76 656 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 C3orf58Q8NDZ4 430 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 ZNF461Q8TAF7 563 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 GOLGA2P5Q9HBQ8 144 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 ANGPTL2Q9UKU9 493 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 CNOT1A5YKK6 2376 aaKnown RBP18.32■□□□□ 0.52
HERC1-207ENST00000560316 RALGAPA1Q6GYQ0 2036 aa18.32■□□□□ 0.52
HERC1-207ENST00000560316 TICRRQ7Z2Z1 1910 aa18.31■□□□□ 0.52
HERC1-207ENST00000560316 EDN1P05305 212 aa18.31■□□□□ 0.52
HERC1-207ENST00000560316 PSMC3P17980 439 aa18.31■□□□□ 0.52
HERC1-207ENST00000560316 VIPR2P41587 438 aa18.31■□□□□ 0.52
HERC1-207ENST00000560316 ARPP19P56211 112 aa18.31■□□□□ 0.52
HERC1-207ENST00000560316 PRPF4BQ13523 1007 aaKnown RBP18.31■□□□□ 0.52
HERC1-207ENST00000560316 N4BP2L1Q5TBK1 243 aaPredicted RBP18.31■□□□□ 0.52
HERC1-207ENST00000560316 EEF1DP3Q658K8 133 aa18.31■□□□□ 0.52
HERC1-207ENST00000560316 HEATR6Q6AI08 1181 aaKnown RBP18.31■□□□□ 0.52
HERC1-207ENST00000560316 ZBTB8OSQ8IWT0 167 aa18.31■□□□□ 0.52
HERC1-207ENST00000560316 PPP1R10Q96QC0 940 aaKnown RBP18.31■□□□□ 0.52
HERC1-207ENST00000560316 NAP1L4Q99733 375 aaKnown RBP18.31■□□□□ 0.52
HERC1-207ENST00000560316 CYP4F11Q9HBI6 524 aa18.31■□□□□ 0.52
HERC1-207ENST00000560316 RBM12Q9NTZ6 932 aaKnown RBP18.31■□□□□ 0.52
HERC1-207ENST00000560316 NCANO14594 1321 aa18.3■□□□□ 0.52
HERC1-207ENST00000560316 ZNF197O14709 1029 aa18.3■□□□□ 0.52
HERC1-207ENST00000560316 ABLIM3O94929 683 aa18.3■□□□□ 0.52
HERC1-207ENST00000560316 SEC24AO95486 1093 aa18.3■□□□□ 0.52
HERC1-207ENST00000560316 HOXC13P31276 330 aa18.3■□□□□ 0.52
HERC1-207ENST00000560316 RBM25P49756 843 aaKnown RBP18.3■□□□□ 0.52
HERC1-207ENST00000560316 UPP1Q16831 310 aa18.3■□□□□ 0.52
HERC1-207ENST00000560316 IL31Q6EBC2 164 aa18.3■□□□□ 0.52
HERC1-207ENST00000560316 CPLX2Q6PUV4 134 aaKnown RBP18.3■□□□□ 0.52
HERC1-207ENST00000560316 PDZD4Q76G19 769 aaPredicted RBP18.3■□□□□ 0.52
HERC1-207ENST00000560316 RUFY3Q7L099 469 aa18.3■□□□□ 0.52
HERC1-207ENST00000560316 HS6ST3Q8IZP7 471 aa18.3■□□□□ 0.52
HERC1-207ENST00000560316 BSNDQ8WZ55 320 aa18.3■□□□□ 0.52
HERC1-207ENST00000560316 SMARCD2Q92925 531 aa18.3■□□□□ 0.52
HERC1-207ENST00000560316 ZNF274Q96GC6 653 aaPredicted RBP18.3■□□□□ 0.52
HERC1-207ENST00000560316 ADPGKQ9BRR6 497 aa18.3■□□□□ 0.52
HERC1-207ENST00000560316 TRPV5Q9NQA5 729 aa18.3■□□□□ 0.52
HERC1-207ENST00000560316 PCDHA12Q9UN75 941 aa18.3■□□□□ 0.52
HERC1-207ENST00000560316 K7ESF4 209 aa18.29■□□□□ 0.52
HERC1-207ENST00000560316 TRAPPC3O43617 180 aa18.29■□□□□ 0.52
HERC1-207ENST00000560316 PRKCBP05771 671 aa18.29■□□□□ 0.52
HERC1-207ENST00000560316 GJA1P17302 382 aa18.29■□□□□ 0.52
HERC1-207ENST00000560316 PMLP29590 882 aa18.29■□□□□ 0.52
HERC1-207ENST00000560316 SLC8B1Q6J4K2 584 aa18.29■□□□□ 0.52
HERC1-207ENST00000560316 LONP2Q86WA8 852 aa18.29■□□□□ 0.52
HERC1-207ENST00000560316 SPEM1Q8N4L4 309 aa18.29■□□□□ 0.52
HERC1-207ENST00000560316 FAM160A2Q8N612 972 aaPredicted RBP18.29■□□□□ 0.52
HERC1-207ENST00000560316 DDX1Q92499 740 aaKnown RBP18.29■□□□□ 0.52
HERC1-207ENST00000560316 C2orf42Q9NWW7 574 aa18.29■□□□□ 0.52
HERC1-207ENST00000560316 INSL5Q9Y5Q6 135 aa18.29■□□□□ 0.52
HERC1-207ENST00000560316 ZNF263O14978 683 aa18.28■□□□□ 0.52
HERC1-207ENST00000560316 MOSPD3O75425 235 aa18.28■□□□□ 0.52
HERC1-207ENST00000560316 MICAL2O94851 1124 aa18.28■□□□□ 0.52
HERC1-207ENST00000560316 ATF2P15336 505 aa18.28■□□□□ 0.52
HERC1-207ENST00000560316 ATP2B1P20020 1258 aa18.28■□□□□ 0.52
HERC1-207ENST00000560316 PTGDRQ13258 359 aa18.28■□□□□ 0.52
HERC1-207ENST00000560316 SF3A2Q15428 464 aaKnown RBP18.28■□□□□ 0.52
HERC1-207ENST00000560316 CCDC6Q16204 474 aa18.28■□□□□ 0.52
HERC1-207ENST00000560316 MAPK6Q16659 721 aa18.28■□□□□ 0.52
HERC1-207ENST00000560316 AASDHQ4L235 1098 aaPredicted RBP18.28■□□□□ 0.52
HERC1-207ENST00000560316 WDR44Q5JSH3 913 aa18.28■□□□□ 0.52
HERC1-207ENST00000560316 CYP4A22Q5TCH4 519 aa18.28■□□□□ 0.52
HERC1-207ENST00000560316 Q6ZS52 159 aa18.28■□□□□ 0.52
HERC1-207ENST00000560316 TCEAL8Q8IYN2 117 aa18.28■□□□□ 0.52
HERC1-207ENST00000560316 DEPDC1BQ8WUY9 529 aa18.28■□□□□ 0.52
HERC1-207ENST00000560316 CCDC113Q9H0I3 377 aa18.28■□□□□ 0.52
HERC1-207ENST00000560316 C2orf40Q9H1Z8 148 aa18.28■□□□□ 0.52
HERC1-207ENST00000560316 TTC12Q9H892 705 aaPredicted RBP18.28■□□□□ 0.52
HERC1-207ENST00000560316 FRYQ5TBA9 3013 aa18.27■□□□□ 0.52
HERC1-207ENST00000560316 ARNTLO00327 626 aa18.27■□□□□ 0.52
HERC1-207ENST00000560316 ACKR2O00590 384 aa18.27■□□□□ 0.52
HERC1-207ENST00000560316 MYL4P12829 197 aa18.27■□□□□ 0.52
HERC1-207ENST00000560316 CNR2P34972 360 aa18.27■□□□□ 0.52
HERC1-207ENST00000560316 SOX9P48436 509 aa18.27■□□□□ 0.52
HERC1-207ENST00000560316 SOX4Q06945 474 aaPredicted RBP18.27■□□□□ 0.52
HERC1-207ENST00000560316 NR5A1Q13285 461 aa18.27■□□□□ 0.52
HERC1-207ENST00000560316 CALCRLQ16602 461 aa18.27■□□□□ 0.52
HERC1-207ENST00000560316 CEP68Q76N32 757 aa18.27■□□□□ 0.52
HERC1-207ENST00000560316 MFSD6LQ8IWD5 586 aa18.27■□□□□ 0.52
HERC1-207ENST00000560316 MCPH1Q8NEM0 835 aa18.27■□□□□ 0.52
HERC1-207ENST00000560316 ZSCAN18Q8TBC5 510 aaPredicted RBP18.27■□□□□ 0.52
HERC1-207ENST00000560316 UROC1Q96N76 676 aa18.27■□□□□ 0.52
HERC1-207ENST00000560316 ZSWIM6Q9HCJ5 1215 aa18.27■□□□□ 0.52
HERC1-207ENST00000560316 RXFP3Q9NSD7 469 aa18.27■□□□□ 0.52
HERC1-207ENST00000560316 CEP72Q9P209 647 aa18.27■□□□□ 0.52
HERC1-207ENST00000560316 BAHCC1Q9P281 2608 aa18.27■□□□□ 0.51
HERC1-207ENST00000560316 SDK1Q7Z5N4 2213 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 SLC38A8A6NNN8 435 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 HEPACAM2A8MVW5 462 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 AXIN1O15169 862 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 XBP1P17861 261 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 TXKP42681 527 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 LRRC32Q14392 662 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 TEAD2Q15562 447 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 DCAF4L1Q3SXM0 396 aa18.26■□□□□ 0.51
HERC1-207ENST00000560316 IQCEQ6IPM2 695 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms