RNA–Protein interactions for RNA: ENST00000560240.5

COPS2-207, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-207ENST00000560240 STX10O60499 249 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 B4GALT3O60512 393 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 ARHGEF15O94989 841 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 STAU1O95793 577 aaKnown RBP8.64□□□□□ -1.03
COPS2-207ENST00000560240 KRT13P13646 458 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 POU3F3P20264 500 aaPredicted RBP8.64□□□□□ -1.03
COPS2-207ENST00000560240 PNPLA4P41247 253 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 SLC11A1P49279 550 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 VAMP7P51809 220 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 WNT7BP56706 349 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 MYL5Q02045 173 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 KRT17Q04695 432 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 SOX4Q06945 474 aaPredicted RBP8.64□□□□□ -1.03
COPS2-207ENST00000560240 GLRA4Q5JXX5 417 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 C15orf39Q6ZRI6 1047 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 FAM114A1Q8IWE2 563 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 TRIM59Q8IWR1 403 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 RNF168Q8IYW5 571 aaPredicted RBP8.64□□□□□ -1.03
COPS2-207ENST00000560240 LRRC52Q8N7C0 313 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 RDH13Q8NBN7 331 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 C18orf25Q96B23 403 aaPredicted RBP8.64□□□□□ -1.03
COPS2-207ENST00000560240 IGSF21Q96ID5 467 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 ANKRD36BP1Q96IX9 119 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 COLEC11Q9BWP8 271 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 LMAN2LQ9H0V9 348 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 THAP9Q9H5L6 903 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 ZNF576Q9H609 170 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 DPP3Q9NY33 737 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 SPG21Q9NZD8 308 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 LMCD1Q9NZU5 365 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 ARMCX3Q9UH62 379 aaPredicted RBP8.64□□□□□ -1.03
COPS2-207ENST00000560240 ADAM28Q9UKQ2 775 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 FAN1Q9Y2M0 1017 aa8.64□□□□□ -1.03
COPS2-207ENST00000560240 PTPRJQ12913 1337 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 LRRIQ3A6PVS8 624 aaPredicted RBP8.63□□□□□ -1.03
COPS2-207ENST00000560240 PODXLO00592 558 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 TRAPPC3O43617 180 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 FGF18O76093 207 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 B3GAT3O94766 335 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 TNNC2P02585 160 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 C4BPAP04003 597 aaKnown RBP8.63□□□□□ -1.03
COPS2-207ENST00000560240 TMEM191BP0C7N4 346 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 DLATP10515 647 aaKnown RBP8.63□□□□□ -1.03
COPS2-207ENST00000560240 TNNI1P19237 187 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 EEF1GP26641 437 aaKnown RBP8.63□□□□□ -1.03
COPS2-207ENST00000560240 CTNNB1P35222 781 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 OR1G1P47890 313 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 AARSP49588 968 aaKnown RBP eCLIP8.63□□□□□ -1.039e-7■■■■■ 61.1
COPS2-207ENST00000560240 CLCNKBP51801 687 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 STX17P56962 302 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 ZNF445P59923 1031 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 TFAMQ00059 246 aaKnown RBP8.63□□□□□ -1.03
COPS2-207ENST00000560240 ELAVL2Q12926 359 aaKnown RBP8.63□□□□□ -1.03
COPS2-207ENST00000560240 ZACNQ401N2 412 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 ANO6Q4KMQ2 910 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 C1orf220Q5T0J3 134 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 SPOUT1Q5T280 376 aaKnown RBP8.63□□□□□ -1.03
COPS2-207ENST00000560240 ZNF697Q5TEC3 545 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 CDKAL1Q5VV42 579 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 C9orf57Q5W0N0 161 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 SMYD5Q6GMV2 418 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 PDE12Q6L8Q7 609 aaKnown RBP8.63□□□□□ -1.03
COPS2-207ENST00000560240 C11orf57Q6ZUT1 292 aaPredicted RBP8.63□□□□□ -1.03
COPS2-207ENST00000560240 DDX53Q86TM3 631 aaKnown RBP8.63□□□□□ -1.03
COPS2-207ENST00000560240 IRF2BP1Q8IU81 584 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 C1orf127Q8N9H9 656 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 KLHL23Q8NBE8 558 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 FBXO22Q8NEZ5 403 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 PLEKHO2Q8TD55 490 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 SLC35C1Q96A29 364 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 CCDC127Q96BQ5 260 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 FAM212AQ96EL1 285 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 TMEM169Q96HH4 297 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 FAXDC2Q96IV6 333 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 PAAF1Q9BRP4 392 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 C17orf80Q9BSJ5 609 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 SRRTQ9BXP5 876 aaKnown RBP8.63□□□□□ -1.03
COPS2-207ENST00000560240 MTMR12Q9C0I1 747 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 DNAJC25Q9H1X3 360 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 TTYH1Q9H313 450 aaPredicted RBP8.63□□□□□ -1.03
COPS2-207ENST00000560240 VRTNQ9H8Y1 702 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 TMEM8AQ9HCN3 771 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 MARCH5Q9NX47 278 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 HCSTQ9UBK5 93 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 TUBGCP4Q9UGJ1 667 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 PUF60Q9UHX1 559 aaKnown RBP8.63□□□□□ -1.03
COPS2-207ENST00000560240 NFE2L3Q9Y4A8 694 aa8.63□□□□□ -1.03
COPS2-207ENST00000560240 SF3B1O75533 1304 aaKnown RBP eCLIP8.62□□□□□ -1.03
COPS2-207ENST00000560240 ARHGEF37A1IGU5 675 aa8.62□□□□□ -1.03
COPS2-207ENST00000560240 CASTOR2A6NHX0 329 aa8.62□□□□□ -1.03
COPS2-207ENST00000560240 LRRC10BA6NIK2 292 aa8.62□□□□□ -1.03
COPS2-207ENST00000560240 M0QZQ0 153 aa8.62□□□□□ -1.03
COPS2-207ENST00000560240 P4HA2O15460 535 aa8.62□□□□□ -1.03
COPS2-207ENST00000560240 KIF4AO95239 1232 aa8.62□□□□□ -1.03
COPS2-207ENST00000560240 SOD2P04179 222 aa8.62□□□□□ -1.03
COPS2-207ENST00000560240 ITGB3P05106 788 aa8.62□□□□□ -1.03
COPS2-207ENST00000560240 ITGB1P05556 798 aa8.62□□□□□ -1.03
COPS2-207ENST00000560240 ATICP31939 592 aa8.62□□□□□ -1.03
COPS2-207ENST00000560240 ZNF165P49910 485 aa8.62□□□□□ -1.03
COPS2-207ENST00000560240 FXR1P51114 621 aaKnown RBP eCLIP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms