RNA–Protein interactions for RNA: ENST00000560004.5

RORA-212, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-212ENST00000560004 C4BPAP04003 597 aaKnown RBP12.36□□□□□ -0.43
RORA-212ENST00000560004 THP07101 528 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 CYP3A5P20815 502 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 IGFBP6P24592 240 aaPredicted RBP12.36□□□□□ -0.43
RORA-212ENST00000560004 LRPAP1P30533 357 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 MTIF2P46199 727 aaKnown RBP12.36□□□□□ -0.43
RORA-212ENST00000560004 GCLMP48507 274 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 TFAMQ00059 246 aaKnown RBP12.36□□□□□ -0.43
RORA-212ENST00000560004 TUSC3Q13454 348 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 MAN2A1Q16706 1144 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 ZACNQ401N2 412 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 TCERG1LQ5VWI1 586 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 SPRED2Q7Z698 418 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 COLGALT2Q8IYK4 626 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 ABI1Q8IZP0 508 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 TSPAN18Q96SJ8 248 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 YME1L1Q96TA2 773 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 TUBGCP2Q9BSJ2 902 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 DNAJB4Q9UDY4 337 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 UBQLN1Q9UMX0 589 aaKnown RBP12.36□□□□□ -0.43
RORA-212ENST00000560004 YBX2Q9Y2T7 364 aaKnown RBP12.36□□□□□ -0.43
RORA-212ENST00000560004 CHD9Q3L8U1 2897 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 VWA8A3KMH1 1905 aa12.36□□□□□ -0.43
RORA-212ENST00000560004 ANO9A1A5B4 782 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 CASTOR2A6NHX0 329 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 F8W810 466 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 TLL1O43897 1013 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 TMEM191BP0C7N4 346 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 MYOGP15173 224 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 TNNI1P19237 187 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 PBX2P40425 430 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 PBX3P40426 434 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 FMO5P49326 533 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 MXI1P50539 228 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 COPB1P53618 953 aaKnown RBP12.35□□□□□ -0.43
RORA-212ENST00000560004 KCNH2Q12809 1159 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 CD300LGQ6UXG3 332 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 SV2AQ7L0J3 742 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 TRAPPC11Q7Z392 1133 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 C3orf58Q8NDZ4 430 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 BEST2Q8NFU1 509 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 BCL7CQ8WUZ0 217 aaPredicted RBP12.35□□□□□ -0.43
RORA-212ENST00000560004 ANKRD36BP1Q96IX9 119 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 RAD9AQ99638 391 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 ANP32EQ9BTT0 268 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 MMRN2Q9H8L6 949 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 TMEM8AQ9HCN3 771 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 SLC38A7Q9NVC3 462 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 MARCH5Q9NX47 278 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 KANSL3Q9P2N6 904 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 MAGEC2Q9UBF1 373 aaPredicted RBP12.35□□□□□ -0.43
RORA-212ENST00000560004 INSL6Q9Y581 213 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.35□□□□□ -0.43
RORA-212ENST00000560004 CHD7Q9P2D1 2997 aa12.35□□□□□ -0.43
RORA-212ENST00000560004 LINC01553A4QN01 128 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 LRRC10BA6NIK2 292 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 GOLGA6L19H0YKK7 550 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 PMM2O15305 246 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 AP5Z1O43299 807 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 ZC3H11AO75152 810 aaKnown RBP eCLIP12.34□□□□□ -0.43
RORA-212ENST00000560004 LRRN2O75325 713 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 KIF4AO95239 1232 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 AFPP02771 609 aaKnown RBP12.34□□□□□ -0.43
RORA-212ENST00000560004 ITGB3P05106 788 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 ITGB1P05556 798 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 GTF2H1P32780 548 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 SLC11A1P49279 550 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 CLCNKBP51801 687 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 BTG3Q14201 252 aaPredicted RBP12.34□□□□□ -0.43
RORA-212ENST00000560004 UPP1Q16831 310 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 DUOXA2Q1HG44 320 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 VWA3BQ502W6 1294 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 EPC2Q52LR7 807 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 C9orf57Q5W0N0 161 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 TMEM173Q86WV6 379 aaPredicted RBP12.34□□□□□ -0.43
RORA-212ENST00000560004 TAS1R2Q8TE23 839 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 RABGGTAQ92696 567 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 SEMA4DQ92854 862 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 CLP1Q92989 425 aaKnown RBP12.34□□□□□ -0.43
RORA-212ENST00000560004 PBX4Q9BYU1 374 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 DPP3Q9NY33 737 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 ITGA11Q9UKX5 1188 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 PCDHA11Q9Y5I1 949 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 CDH23Q9H251 3354 aa12.34□□□□□ -0.43
RORA-212ENST00000560004 LGALS16A8MUM7 142 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 TMEM189-UBE2V1I3L0A0 370 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 PODXLO00592 558 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 PIRO00625 290 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 SPTLC1O15269 473 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 XPOTO43592 962 aaKnown RBP12.33□□□□□ -0.44
RORA-212ENST00000560004 CST3P01034 146 aaPredicted RBP12.33□□□□□ -0.44
RORA-212ENST00000560004 TNNC2P02585 160 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 CA3P07451 260 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 GALTP07902 379 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 PRKCSHP14314 528 aaPredicted RBP12.33□□□□□ -0.44
RORA-212ENST00000560004 POLR2BP30876 1174 aaKnown RBP12.33□□□□□ -0.44
RORA-212ENST00000560004 AP3M2P53677 418 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 BCAR1P56945 870 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 FANCCQ00597 558 aa12.33□□□□□ -0.44
RORA-212ENST00000560004 MYL7Q01449 175 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms